Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02704 ATGGCTTGCACCGATAACACGGCCGTTACCACCACCAACGAAGCAGGCGGTGCTACCACCATCTCCGCCGTGCATCCCGACATAATTCAAACCCACATCCTTAGACGCCTGGACGGTCCCGCGCTGGCCTCAATCGCCAGCACGTGCTCCCAGCTCCACGCGCTCTCAGAACACGAGCAGCTCTGGGAGAACATCTGCCACGCCACGTGGCCCTCCACCAATACGCCACGCGTGCGCCACTTAATCTCGACGTTCCCACGCGCTTCTCGTTCTTTTTTCTCCGACTCCTTCTCTTCGTTTGCTGCTGCACGCAGTTCTGACCACACGAACATCGAGCGTACGCCGGAGCTCGTCACGGCGGTGGACCTCTTCCACGGGATGAGGCCGGTTCTGTCGCGGGTGGTGGAGACGGAGACGGAGTCCGGGTGGTTCCGGTGCTCGCCGTTCAGAGTTGACGTGCTGGATCCGAAGGAGGCGGTGGCGACGGCGATGGAGTATCCGCGGAGCGAGGAAGCGTGCGAGAGGCTCCGGGAGGAGTTGAGGCTGAGCTGGATAGTGGTGGATCCTGAGGGAAAGCGTGCAGTGAATGTGTCGAGCGGGAGGGCGGTGTCTGTGGAGCGGCACTGGCTGAGCGGGGAGGTGCAGGTGAGGTTCGCGACGGTGGTGAGCGGAGGAGAGAGGGGGTCGGCGTCGGAGGCGGTGCTGTGCAGCGTGAGTGTGACTTGCGGGAGTGAGATGCAGGTGAGGGAAGCTTGTGTGCAGATGGAGGACATGGATGGAATGGTCCTGAACGGGAAGGAGAGTTTGGGAATTTTGCAGAGAGCATTGGAGGGTAAAAGGGGAAGATTATTTGCTGAAGGAGACAACGAAGGAAGGGATAGCTACTTGGAATTCATGAGTAGAAAGATGGAGAGAAAGGAAAAGAAAATGAGAGACGAAAGAAGACTGGATATGCTCTGCGTGGCCCTCGCGCTTTTGTCCTTTGCCGCTATTTCCACACTATTTTTCTCCTGA 1014 0.5858 MACTDNTAVTTTNEAGGATTISAVHPDIIQTHILRRLDGPALASIASTCSQLHALSEHEQLWENICHATWPSTNTPRVRHLISTFPRASRSFFSDSFSSFAAARSSDHTNIERTPELVTAVDLFHGMRPVLSRVVETETESGWFRCSPFRVDVLDPKEAVATAMEYPRSEEACERLREELRLSWIVVDPEGKRAVNVSSGRAVSVERHWLSGEVQVRFATVVSGGERGSASEAVLCSVSVTCGSEMQVREACVQMEDMDGMVLNGKESLGILQRALEGKRGRLFAEGDNEGRDSYLEFMSRKMERKEKKMRDERRLDMLCVALALLSFAAISTLFFS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02704 337 Gene3D - 11 108 - -
Spst1g02704 337 Coils Coil 296 316 - -
Spst1g02704 337 PANTHER F-BOX PROTEIN-RELATED 14 331 IPR045283 -
Spst1g02704 337 SUPERFAMILY F-box domain 26 89 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02704 Spst-Chr1 35520241 35521254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02704 - - gmx:100801673 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02704 1 35520241 35521254 Spst1g02704 1 35520241 35521254 ECH
Spst7g01429 7 61795266 61796794 Spst1g02704 1 35520241 35521254 PCT