Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02397 ATGGATACTTCCTGCAGGATTGCTGGGTTCCAGTATGATTGCTTGCTTTTCGATATGGACGATACTCTCTACCCATTGAGCTCAGGTCTCAATTTGGCATGTCGGAAGAACATAGAAGAGTACATGTTAAAACACTTGCATATGGAAGAAAGTGAAGTACCAAATATTTGCCTGGATTTTTACAAGGAATATGGGACAACTATGGCAGGACTAAAGGCATTTGGTTATGAGTTTGACAATGATGAATTTCATGCCTACGTGCATGGAAGACTACCATACGGGAAACTGACGCCAGATCCAGTGTTAAGGAACCTTCTGCTTACCATGCCTCAGCGTAAAATAGTATTCACAAATGCAGATGAAGCACATGCACACCAAGTGCTCAGCAGATTGGGCTTGAAAGAATGTTTTGATAGCATCATTTGCTTTGAAACGCTTAATCCTCCTAATCACACAAATATACCAACTGATAATCACGTCCTAACATGGAGTAACTCGTTTGACAAAAAAGATTGTAACCAGGTAGAGAGTGCGTGTTTCAACTCCAAGACACAAATCCTCTGCAAACCCTCTGTGGAAGCCATTGAAGCCGCCATTCAGATTGCTAATTTAGATCCAAGGAAAACGTTGTTTTTTGATGACAGTGCTAGAAACATTGCAAGTGGGAAGGCTGCTGGACTTAACACAGTTATTGTGGGACGCTCAGATTTGGTGCCTGGTGCCGACCATGCACTGAACAGCATTCATAACATCAAAGAAGCATTACCCGAAATATGGGAGATTGAGGGAGACCAACAGCAAATGATCCAATCCCCAACAGTTGAAACCATGGTCCTTGCATGA 843 0.4247 MDTSCRIAGFQYDCLLFDMDDTLYPLSSGLNLACRKNIEEYMLKHLHMEESEVPNICLDFYKEYGTTMAGLKAFGYEFDNDEFHAYVHGRLPYGKLTPDPVLRNLLLTMPQRKIVFTNADEAHAHQVLSRLGLKECFDSIICFETLNPPNHTNIPTDNHVLTWSNSFDKKDCNQVESACFNSKTQILCKPSVEAIEAAIQIANLDPRKTLFFDDSARNIASGKAAGLNTVIVGRSDLVPGADHALNSIHNIKEALPEIWEIEGDQQQMIQSPTVETMVLA 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02397 280 Gene3D - 74 259 IPR023214 -
Spst1g02397 280 NCBIfam HAD-IA family hydrolase 186 232 IPR006439 -
Spst1g02397 280 SUPERFAMILY HAD-like 14 236 IPR036412 -
Spst1g02397 280 NCBIfam pyrimidine 5'-nucleotidase 13 232 IPR010237 -
Spst1g02397 280 SFLD C1.5.3: 5'-Nucleotidase Like 11 261 IPR010237 -
Spst1g02397 280 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 10 270 - -
Spst1g02397 280 SFLD Haloacid Dehalogenase 11 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02397 Spst-Chr1 32541786 32543691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02397 K18551 - gmx:100786323 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02397 1 32541786 32543691 Spst10g01837 10 18662646 18664468 PCT