Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01837 ATGGATACTGCTCTTAGGAGGAATGTTGGAGTCAAGTACGAGTGCTTGCTTTTTGATATGGATGATACTCTCTACCCGTTGAGTTTAGGTCTCAATTTGTTTTGTCGCAAGAACATACAAGAGTATATGTTAGAACGGTTGCATATTGAAGAAAATGAAGTGCCAAAAATGTGCTTGGATTTGTATAGAGAATACGGGACAACCATGGCAGGATTGAAGGTCCTTGGTTATGAATTTGACAATGACGAGTTTCATGCTTACGTGCATGGAAGATTACCATATGAAAAACTGAAGCCTGATCCAGTACTAAGGAACCTTCTGATTTCCATGCCTCAACGTAAAATAATATTCACCAATGCAGATCACGCACATGCTGTTAAAGTTCTCAGCAGATTGGGTTTGGAAGATTGTTTTGAGGGGATCATATGCTTTGAAACGCTTAATCCTCAAAAACAAATCAACTACATAGATTTACCGAATGATAATCATGTTCTCAAAGATTTAACACAGAGTGGATGTTTAAATTCCCACACACATATTCTCTGTAAACCATCTGTGGAAGCCTTTGAAGCTGCTATTCGGATTGCTAATGTGGATCCAAAGAAAACAATTTTCTTTGATGACAGTGTTAGAAATGTTGCAAGTGCAAAAGTAGTTGGACTTCATACTGTTATAATGGGTCATTCAGATTTGGTGCCTGGTGCTGATCATGCGCTGAATAGCATTCATAATATCAAAGAAGCACTACCTGAAATATGGGAGATTGAAGAAAGCAAACAACAGCAAAAGATTGAACCCCCAGCAGTGGAAACCATGGTCCTAGCTTAA 828 0.3853 MDTALRRNVGVKYECLLFDMDDTLYPLSLGLNLFCRKNIQEYMLERLHIEENEVPKMCLDLYREYGTTMAGLKVLGYEFDNDEFHAYVHGRLPYEKLKPDPVLRNLLISMPQRKIIFTNADHAHAVKVLSRLGLEDCFEGIICFETLNPQKQINYIDLPNDNHVLKDLTQSGCLNSHTHILCKPSVEAFEAAIRIANVDPKKTIFFDDSVRNVASAKVVGLHTVIMGHSDLVPGADHALNSIHNIKEALPEIWEIEESKQQQKIEPPAVETMVLA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01837 275 Gene3D - 77 253 IPR023214 -
Spst10g01837 275 NCBIfam HAD-IA family hydrolase 181 225 IPR006439 -
Spst10g01837 275 NCBIfam pyrimidine 5'-nucleotidase 14 225 IPR010237 -
Spst10g01837 275 SUPERFAMILY HAD-like 15 229 IPR036412 -
Spst10g01837 275 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 10 264 - -
Spst10g01837 275 SFLD C1.5.3: 5'-Nucleotidase Like 12 258 IPR010237 -
Spst10g01837 275 CDD HAD_5NT 15 227 IPR010237 -
Spst10g01837 275 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 12 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01837 Spst-Chr10 18662646 18664468 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01837 K18551 - gmx:100814291 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01837 10 18662646 18664468 Spst10g01837 10 18662646 18664468 ECH
Spst1g02397 1 32541786 32543691 Spst10g01837 10 18662646 18664468 PCT