Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02364 ATGAGCACCGATTCCGAAGCTGTTAAGGGCACAGGTTTCCCTCTTCCTCGCTGCCCCTCTTCAAATTCAAATCCACTTCCCTCTTCACTCGATCTCTGGTCACAAATCGTCGCCGCTGAATCCCCCCACCCCCAGCGAATCGACGTCGTTTACCGGAGAAGACAACCTCGCAACCCCCACAATCATCCCAACTCAAATCCTCCCGATGCTGCCCTACCGCGTCCGACTCGCCCGAGTTTGGATCCCAACAAGCGAGTCAGTTGGAATCGTTCGCTTTCCATCAGAGGGAGGACTAGTATTGCCGTTGGTGCTTGTATGGTTTACCAGCCTCAGTTAAAGAAGGACAAAAGGAAAGGAAAACCCGCACTTCCCAAAGGGAAGCTTGTGCAACCTCCAAACGTTGAGAAGGAGAAGTTATACTTCGAAGAGGTTGATGCTTTTGAGTTGTTGGAGGAAAGCCCCTCACCCAAGAAAAACACATGGATCATAGGTGATATGGTACAAGAGGGACCGATGCCAACTATATGCTCCAGATTAGAAAAGTGGTTACACTCTAGAAGGTTAAACCACACCTACGGTCCCTCTAGCACACTGTCCAAGATACTAGATACTTCATCCACTCGTTTAGAAGCTATTCAAGATATTGATTTCAGTACTCCTGAAATGAGAACATTGGAACGAACTGAGAAAAGCAATTCACTACTGCAAGCCATTAAAACTGGAGATAGGAAACCATCTATTGAAAATGATATTCATCTGCAAACAAATGAAGAGATGCTGTTGGCTCAATGTAGTGAAGGACGTGAAGATATTAATGCAGCTGTTAAGAAACTTTCTCTGGCATCAACGTCTTCGATTGACGATGATCACATTAGTCCATTTTCCGCTTTATTATCAATCTGTGGACAGTCCGCGCCTTCACTGTTACAAAATATCTTCTCTAGTAACTTGTTTTTGCTTGCCATGGGTGATCTAAGTGGCTCAAAAACTATTGTGAAAGTTGGTGAAGGAACATTTGGAGAAGCCTTCAAGGTTAATAATTATGTCTGCAAAATAGTTCCGTTTGACGGGGACTTCAGAGTGAATGGGGAAATACAGAAGAGATCTGAAGAATTGCTGGAGGAGGTACTTCTTTGCAAAACTCTCAATTTATTGAGAGGAAAAGAAGGAGCTTCTGATAATTTATGCCGCGCATTTATAGATTGCATAGATGTCTCATCTAGTTATGGTCCTGTCGTCTGTGATAGATTTAGAGTATGTCAGGGCCCTTATGATGCGGCACTAATTCGAGCATGGGAAGATTGGGATCTTAAGCATGGTTCAGAGAATGATCATCCAAAAGAGTTCCCAGATAAACAGTGTTACGTGGTGTTCGTACAAGAACATGGTGGCAAGGATCTCGAAGGATTTGCACTCCTGAATTTTGACGAGGCAAGGGCGTTACTGGCTCAGGTTACGGCTGGGCTTGCTGTGGCTGAGTCTGCGTTTGAATTTGAACACCGAGATCTTCACTGGGGAAATATACTTGTGGGCCGAAGTGATTCTGAAACGTTGCAGTTCACTCTCGATGGCAGGAAGATGTTAGTCAAAACGTATGGTTTAATAATATCTATTATTGACTTCACTTTATCAAGAATAAACACAGGTGATAGAATACTGTATTTAGATCTTTCATCTGATCCTGACCTATTTAAAGGACCGAAAGGAGACAAACAGTCAGAAACATATCGGAGGATGAAGGAGGTGACTGAAGATTGGTGGGAAGGAAGTTGTCCAAAAACAAACGTTTTATGGTTGATCTATTTGGTAGACATACTCCTCACGAAGAAATCATTTGAACGCACCTCGAAGCACGAGAGAGATCTACGCTCCTTCAAGAAACGTCTTGATCAGTATGATTCGTCAAAGGAAGCAATTCTTGATCCCTTCTTCACCGATTTGTTCATTGAGTCTGACGCAAAGATACTCCAAACCAACGTCCATGCACATGCTCTGATCTCAAATCCCGGAAAGGTGGACAAGTGGAAGCTGGTGATATTGCGAAAGATAAAGAAGCAGGAACTTACTGAAAAAGCATGTTTCTGGTCACAGCCAAACACTTCCCAACTCATCATCCTTCGTACTGCATCTACACCCTCTGTTGCTCCCGCATTCCTCCACAAAACCAAGATCTCCAAATCTGAGATTCGGCTTTCTGTTACTGATTACATGCTTTTGAAGACACTCATCGACACCAACCTGTCAGTTGATTTCTTCTTAAACGAAAGCCTGGTTGAAAATTTTGTTTCTTCAAAATCGTCTCCAGTGTCTTCGCTGAAAGTTCATCTTTTGGACATTCTTCCACAAGTGGACATCAGAAGCATCATTGTTAGATGTGGCAGTCAGTGTTTAGGCCGAGATGAGACGCCTTCACTCATTCGTGTTTTGAAATCAATTCATTCGTTTATCAGCAATCTTCAACTAGGGAGGGAAGTAAAAGTCTCAGTGGCATTTCCACTTTCATTCTTAGAGTATTTGAATGCTTCATATGAAAACGATCTTCTTAGGATTGTTGTGTTTCTAAAGAAAATAGATTCCTTTATCATGATAGAAGACACCATTGATGGGGAATCAGGCATTGTTCAGTCTGTTATTGAAAGAGCCACATTTGCTGCTTCTATTCTTCCTTGCAAAGATGTTCCTGTGGTTCTCACAATCAAGAGCCGTGATATTCCCTGTTCAATGGAATTAGCTCAATTTAGTGAATCAGTATCTAAATATCTTGAAGCAGGATCTCATGTTACAAAAAGAATAGTTGCATTGTATGCAGAAGTACAGACAACCAAAGGTTTTGTACTGGGAGATCTCAAAAGAGAGGAGGGAGATGACATACTTCCTTTGTTCCTAAGAGAAAAGCTAGGCCAAGTGCACATCAGAAGAGTTCTCCAAGACACAACCAACTTACCAAACACAGTTTCCCCCACAAATCCAACCCCACCTACACCAGTCATCTCACCTCCTGATACACCAACCATCATCACAGTTCCTTCCACCAATCCTGTCACAGTTTCCCCCACTAATCCAGGGGCAACACCTGTGACAGTTCCTTCGACTACACCACCTGTTCCCTTAGCCCCTACAAATCCAGCCAATCCAGGGGCTCAACCCGTTACCAACCCTGTGACCTCTTATCCATCCCCATCAGGAAATGGTCCTATCACAAATACCCTTTCTCCTCCTCCAAACACAAATGGTCAAGCCACAGGGGGGCAGAGTTGGTGTGTGGCAAAGACTGGAGTTTCAGAAGCTACTCTTCAATCAGCTCTGGACTATGCATGTGGAATGCAAAGTGTGGATTGTTCACAAATCCAGCAAGGTGGGAGTTGTTACAATCCAAATTCTCTACAAAACCATGCTTCTTTTGCCTTCAACAGCTACTACCAGAAGAATCCTGCGTCAACAAGCTGTGACTTTGGAGGCGCTGCAACTATAGTTAACACCAATCCAAGCTCGGGTTCTTGCATTTACCCATCATCTTCAGGGGGAGGCACATCCGGCTCTAATGGCTCACCTTCAGTTTTAGGGTCTCAAAGCCCTCCTGATTTAAATACCTCCAATTCAGCTCTGAGACCTTTTCTTGATTGTATGGTTCTGGTGGTGATATCGTTAGTCAGCGTAAGACTCACTATATAA 3672 0.4352 MSTDSEAVKGTGFPLPRCPSSNSNPLPSSLDLWSQIVAAESPHPQRIDVVYRRRQPRNPHNHPNSNPPDAALPRPTRPSLDPNKRVSWNRSLSIRGRTSIAVGACMVYQPQLKKDKRKGKPALPKGKLVQPPNVEKEKLYFEEVDAFELLEESPSPKKNTWIIGDMVQEGPMPTICSRLEKWLHSRRLNHTYGPSSTLSKILDTSSTRLEAIQDIDFSTPEMRTLERTEKSNSLLQAIKTGDRKPSIENDIHLQTNEEMLLAQCSEGREDINAAVKKLSLASTSSIDDDHISPFSALLSICGQSAPSLLQNIFSSNLFLLAMGDLSGSKTIVKVGEGTFGEAFKVNNYVCKIVPFDGDFRVNGEIQKRSEELLEEVLLCKTLNLLRGKEGASDNLCRAFIDCIDVSSSYGPVVCDRFRVCQGPYDAALIRAWEDWDLKHGSENDHPKEFPDKQCYVVFVQEHGGKDLEGFALLNFDEARALLAQVTAGLAVAESAFEFEHRDLHWGNILVGRSDSETLQFTLDGRKMLVKTYGLIISIIDFTLSRINTGDRILYLDLSSDPDLFKGPKGDKQSETYRRMKEVTEDWWEGSCPKTNVLWLIYLVDILLTKKSFERTSKHERDLRSFKKRLDQYDSSKEAILDPFFTDLFIESDAKILQTNVHAHALISNPGKVDKWKLVILRKIKKQELTEKACFWSQPNTSQLIILRTASTPSVAPAFLHKTKISKSEIRLSVTDYMLLKTLIDTNLSVDFFLNESLVENFVSSKSSPVSSLKVHLLDILPQVDIRSIIVRCGSQCLGRDETPSLIRVLKSIHSFISNLQLGREVKVSVAFPLSFLEYLNASYENDLLRIVVFLKKIDSFIMIEDTIDGESGIVQSVIERATFAASILPCKDVPVVLTIKSRDIPCSMELAQFSESVSKYLEAGSHVTKRIVALYAEVQTTKGFVLGDLKREEGDDILPLFLREKLGQVHIRRVLQDTTNLPNTVSPTNPTPPTPVISPPDTPTIITVPSTNPVTVSPTNPGATPVTVPSTTPPVPLAPTNPANPGAQPVTNPVTSYPSPSGNGPITNTLSPPPNTNGQATGGQSWCVAKTGVSEATLQSALDYACGMQSVDCSQIQQGGSCYNPNSLQNHASFAFNSYYQKNPASTSCDFGGAATIVNTNPSSGSCIYPSSSGGGTSGSNGSPSVLGSQSPPDLNTSNSALRPFLDCMVLVVISLVSVRLTI 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02364 1223 SMART X8_cls 1085 1169 IPR012946 -
Spst1g02364 1223 MobiDBLite consensus disorder prediction 61 75 - -
Spst1g02364 1223 FunFam serine/threonine-protein kinase haspin 463 646 - -
Spst1g02364 1223 MobiDBLite consensus disorder prediction 1 29 - -
Spst1g02364 1223 MobiDBLite consensus disorder prediction 55 89 - -
Spst1g02364 1223 MobiDBLite consensus disorder prediction 1171 1194 - -
Spst1g02364 1223 Pfam X8 domain 1086 1156 IPR012946 -
Spst1g02364 1223 Gene3D Glycosidases 705 865 - -
Spst1g02364 1223 SUPERFAMILY Protein kinase-like (PK-like) 333 649 IPR011009 -
Spst1g02364 1223 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 185 647 - -
Spst1g02364 1223 Pfam Haspin like kinase domain 232 636 - -
Spst1g02364 1223 Gene3D - 1081 1173 - -
Spst1g02364 1223 ProSiteProfiles Protein kinase domain profile. 328 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02364 1223 SMART serkin_6 328 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02364 1223 Gene3D Transferase(Phosphotransferase) domain 1 463 644 - -
Spst1g02364 1223 SMART DUF3635_2 561 644 IPR024604 -
Spst1g02364 1223 FunFam Glucan endo-1,3-beta-glucosidase 4 1080 1173 - -
Spst1g02364 1223 Gene3D Phosphorylase Kinase; domain 1 322 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02364 Spst-Chr1 32237881 32249457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02364 1049 1172 Glycoside Hydrolase AT2G05790 43.411 7.47e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02364 K16315 - gmx:100790036 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02364 1 32237881 32249457 Spst1g02364 1 32237881 32249457 ECH
Spst1g02364 1 32237881 32249457 Spst10g01795 10 18326465 18328957 PCT