Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02355 ATGCATACGGGGTTCAATTGTGATCGCACAATTCCTAGATTGCATTTTGGGGTTAACAGCGGTGCAGCATGTTTTGCTATAGAGAACCAAGCAGTCAATGAGGCTAATTTTCGTTGCTGTGATGAAATGGGTTGGAAGCCCCAGAAAGTCCCTATTGTTACTTCGGACGGTGGAATTTCACGAACAAGGGAGACTTCACTTCCTGTTGAGGAAATCACCAAAGCCTTAGCAGAAAAGGGATATGAAGTAATGGCATCAGATGATGCAGGCAGATTAAAGGTTCCAGAACTTTGTGAAGACAGATTTATTGACATCTTCAAGGACTACCATGTCAATAATATTCAATATAAGTGA 354 0.4153 MHTGFNCDRTIPRLHFGVNSGAACFAIENQAVNEANFRCCDEMGWKPQKVPIVTSDGGISRTRETSLPVEEITKALAEKGYEVMASDDAGRLKVPELCEDRFIDIFKDYHVNNIQYK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02355 117 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 11 91 IPR016125 -
Spst1g02355 117 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 13 91 IPR036440 -
Spst1g02355 117 Gene3D - 7 99 IPR036440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02355 Spst-Chr1 32158524 32160136 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02355 K01304 - gmx:100789152 141.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02355 1 32158524 32160136 Spst1g02355 1 32158524 32160136 ECH
Spst1g02355 1 32158524 32160136 Spst10g01789 10 18259759 18262138 PCT