Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01789 ATGGGGTCTGAAGGTTCTCCAGCAGCAGTAACATCAGTTTATGTTACAGGTTTCAAGAAATTCCATGGAGTTTCAGAGAATCCAACTGAGAAAATTGTCAATAATTTAATGGAGTATTTGAAGAAGAAGGGTTTGCCAAAAGGGTTGGTTATTGAGAGCTGCAACATTCTTGAGACCGCGGGTCAAGGAGCAGTCGTTCCCCTCTACCAGATATTGCAGTCTTCCATTACTCCCAAGGAGTCTGAATCTCCAAGTTCCAACAGAATTATCTGGCTGCATTTTGGGGTTAACAGTGGCGCAACAAGGTTTGCTATAGAGCGTCAAGCTGTCAATGAGGCTACCTTCCGCTGCCATGATGAAATGGGATGGAAGCCTCAGAAAGTGCCCATTGTTCCTTCAGATGGTCCGATTACACAAACACGTGAGACTACTCTTCCTGTGGAGGAGTTCACCAAAGCCTTGGCAAGTAAGGGTTATGATGTAATGACATCTGATGATGCGGGCAGGTTCGTGTGCAACTATGTTTACTATCATTCCCTTCGCTTTACGGAGCAGAACGGGTTGAAATCCCTTTTTGTGCACGTACCACTCTTCTCTACAATCGATGAAGAGATCCAAATGCAATTTGCTGCTTCCGTGCTAGAGGTAATTGCTTCAACATGCTAG 666 0.4489 MGSEGSPAAVTSVYVTGFKKFHGVSENPTEKIVNNLMEYLKKKGLPKGLVIESCNILETAGQGAVVPLYQILQSSITPKESESPSSNRIIWLHFGVNSGATRFAIERQAVNEATFRCHDEMGWKPQKVPIVPSDGPITQTRETTLPVEEFTKALASKGYDVMTSDDAGRFVCNYVYYHSLRFTEQNGLKSLFVHVPLFSTIDEEIQMQFAASVLEVIASTC 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01789 221 Pfam Pyroglutamyl peptidase 13 198 IPR016125 -
Spst10g01789 221 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 11 219 IPR016125 -
Spst10g01789 221 Gene3D - 9 221 IPR036440 -
Spst10g01789 221 FunFam Pyrrolidone-carboxylate peptidase isoform A 10 220 - -
Spst10g01789 221 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 12 218 IPR036440 -
Spst10g01789 221 CDD Peptidase_C15 13 219 IPR000816 GO:0005829|GO:0006508|GO:0016920
Spst10g01789 221 PIRSF Pyrrolidone-crbxlat_pptds 10 221 IPR000816 GO:0005829|GO:0006508|GO:0016920
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01789 Spst-Chr10 18259759 18262138 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01789 K01304 - gmx:100305735 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01789 10 18259759 18262138 Spst10g01789 10 18259759 18262138 ECH
Spst1g02355 1 32158524 32160136 Spst10g01789 10 18259759 18262138 PCT