Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02344 ATGAAATCATTTCGAAGCCCGATCTCAGTCACAAGGATGGATCTGGGGCAGCCTGTAGAAGAAAACTACGCTAATCCAAACACTTGCTTCTTTCATGTTCTCTTCAAGGCTTCAGCCTTGGCATTTTACATCCTCTCTGCCCTCTTTATTGATAACTTTGTCATCATTTTTGTGACGACTGTCTTTCTAGCCGCTCTTGATTTTTGGGTAGTCAAGAATGTGAGTGGAAGAATTTTAGTTGGTATGAGGTGGTGGAATGAAATAGATGATCTGGGTGAGAGTGTATGGAAATTTGAGTGTCTCGATCAAGAGTCATTGGCCCGGATCAACAAGAAAGATTCATGGCTTTTCTGGTGGACACTTTACCTTACAGCAGTTGCATGGACTATGATGGCATTGTTCTCACTCATAAAGCTGCAAGCTGATTATCTCCTAGTTGTTGGAGTTTGTTTGACCCTCAGTATTGCAAATATTGTTGGTTTTACCAAATGCCAAAAAGATGCTAAGAAGCGGATTCAACAATTTGCCTCCCAAGCAATTGCCTCACGGGTCTCATCTACATTACAGTCAGCATTCAGTGTTGTCTGA 588 0.4184 MKSFRSPISVTRMDLGQPVEENYANPNTCFFHVLFKASALAFYILSALFIDNFVIIFVTTVFLAALDFWVVKNVSGRILVGMRWWNEIDDLGESVWKFECLDQESLARINKKDSWLFWWTLYLTAVAWTMMALFSLIKLQADYLLVVGVCLTLSIANIVGFTKCQKDAKKRIQQFASQAIASRVSSTLQSAFSVV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02344 195 PANTHER UNCHARACTERIZED 20 191 IPR008564 GO:0016020
Spst1g02344 195 Pfam Eukaryotic protein of unknown function (DUF846) 25 164 IPR008564 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02344 Spst-Chr1 32057753 32061007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02344 K26752 - gmx:100527655 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02344 1 32057753 32061007 Spst10g01783 10 18221116 18224170 ECH
Spst1g02344 1 32057753 32061007 Spst1g02344 1 32057753 32061007 ECH
Spst1g02344 1 32057753 32061007 Spst10g01783 10 18221116 18224170 PCT