Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01783 ATGGATCCCAACCAGCCTGTGGGTGAAAACTACGCCAATCCCAAGACTTGCTTCTTTCATGTCCTCTTCAAGGCTGCAGCCTTGGCATTTTACATCCTCTCGGCCCTCTTTATTGATAACTTTGTCATCATTTTTGTGGTGACTGTCCTTCTTGCTGCCCTTGACTTTTGGGTAGTCAAGAATGTGAGTGGGCGAATTTTAGTTGGTTTGAGGTGGTGGAATGAAATTGACGATCTGGGTGAGAGTGTTTGGAAATTTGAGTGTCTTGACCATGAGTCATTGGCTCGGATGAACAAGAAAGATTCTTGGCTTTTCTGGTGGACCCTGTACCTCACGGCTGTTGCATGGATTTTGCTCGCAATATTCTCACTCATAAGGCTTCAAGCTGATTATCTGCTTGTTGTTGGAGTTTGTGTGACCCTCAGCATTGCAAATATTGTTGGTTTTACCAAATGCAAAAAAGATGCCAAGAAGCAGATTCAACAATTTGCCTCTCAGACAATTGCTTCTCAGTTCTCATCTACCCTACAGTCAGCATTCAGTGTCGTCTGA 552 0.4402 MDPNQPVGENYANPKTCFFHVLFKAAALAFYILSALFIDNFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEIDDLGESVWKFECLDHESLARMNKKDSWLFWWTLYLTAVAWILLAIFSLIRLQADYLLVVGVCVTLSIANIVGFTKCKKDAKKQIQQFASQTIASQFSSTLQSAFSVV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01783 183 Pfam Eukaryotic protein of unknown function (DUF846) 13 152 IPR008564 GO:0016020
Spst10g01783 183 PANTHER UNCHARACTERIZED 9 179 IPR008564 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01783 Spst-Chr10 18221116 18224170 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01783 K26752 - gmx:100527655 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02344 1 32057753 32061007 Spst10g01783 10 18221116 18224170 ECH
Spst10g01783 10 18221116 18224170 Spst10g01783 10 18221116 18224170 ECH
Spst1g02344 1 32057753 32061007 Spst10g01783 10 18221116 18224170 PCT