Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02341 ATGATCACGGTCAACCTTGTTTGCAATTGCACCATGAAACCATCCCCTAAGATCCTAATTGGTTACAAAAATTCATCGATTCTTGCAAGATGCCACCGTACAATAACCATGTCTATGTCCAATAACTCTACCACTTGTGGCCTCAATCATGATCACAACACCATGCAGTTCCCTTTTCACGCGCGGGAATTTGGACGCGTAATGCATGGTAGCCAACAAGTTTTTGGGTTACCCTCCTCGAGTTTTGGCCAATCAAGTTTAATCGCAACAACAACAACAAAACGGAGTGTGTCTACCATTGCCGGAGTTGACTTCAATTTCAAGTCTCGTGCCTTCTCAAGCTCCATGGAGACATATGAGAACAATAATGGTAAAATGGTTTACGTAAAGAGTGGCCTGAATGTGAACCCAATAATGGTGGAAAGGGTTGACGATGGTGAGAATAGTGTTGCAGGAGAGGAAGTGTCTAATTTAGAAGTTGGTGAGAAAAATGAGAAGAGAGAGAATGTAGAAGAAGAGGGTGAGAAGGTAGAGGAAGAGGAGACAGAAGTGGAGAAAGAGGCATGGAAGCTATTGCAAGAGGCGCTTGTGACGTACTGTGACACCCCTGTGGGGACGGTGGCAGCGAATGATTCAGATGATCAACAACCTTTGAATTATGATCAGGTTTTTATTAGGGATTTTATCCCTTCAGCTCTTGCTTTCTTGCTCAAGGGAGAAAAGGAGATTGTCAAGAACTTTCTCCTGCACACCTTGCAACTCCAGAGTTGGGAGAAAACAGTGGACTGCTATAGCCCAGGGCAGGGCCTGATGCCTGCTAGTTTCAAAGTTAAAACAATGAATCTTGATGAAGGAAAAACCGAAGAAGTTTTAGATCCAGATTTTGGGGAATCAGCTATAGGTCGTGTTGCTCCTGTAGATTCAGGATTGTGGTGGATCATCCTGCTGCGGGCTTATGGGAAGCTTACTGGGGACTACGGCTTGCAAGAAAGGTTGGATGTTCAAACAGGCCTAAAAATGATCCTTAATCTGTGCTTAACGGATGGCTTTGACATGTTTCCTTCTCTGTTAGTAACTGATGGATCTTGCATGATAGACAGGAGGATGGGTATTCATGGCCACCCCCTTGAGATTCAAGCCTTGTTTTACTCAGCTCTTCGCTCGGCCCGTGAGATGGTTGCTGCAGATGAAAATTCCAAGAATCTGGTTGGAGAAATTAATAACAGACTCAGTGCACTGTCATTTCACATTAGAGAATACTACTGGTTGGACCCGCAAAAGATGAACGAGATATACAGGTACAAAACAGAAGAGTACTCATTGAATGCCACAAACAAGTTCAACATCTATCCAGATCAAATCCCTTTGTGGGTAACTGATTGGGTTCCAGAGGGAGGAGGATATCTGCTAGGGAATCTGCAGCCAGCTCATATGGATTTCAGGTTTTTCATGCTTGGAAATCTTTGGTCAGTTGTTTCCTCTTTGGGCACCCCAAGACAGAATAATGCTATTTTGAATCTGATAGAAGCAAATTGGGATGATCTCGTGGGGCAAATGCCACTTAAGATATGTTATCCTGCCTTGGAGCATCATGAATGGCGAATAATTACAGGCAGTGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGGTCCTGGCCAACCCTTCTGTGGCAGTTCACACTTGCATGCATGAAAATGGAGAGAACTGAACTGGCAGAGAAAGCAGTTGCTTTGGCCGAGAAGAGGCTGCCACGTGATTCTTGGCCAGAATATTATGACACCCGCACAGCAAGATTTATTGGTAAACAAGCCCGGCTTTATCAAACTTGGACTTTAGCTGGGTACCTTGCATCTAAGATGCTTTTGAAGAGTCCTGAAATGGCTTCCTTGTTATGCTGGAATGAGGATTTTGAGATCCTGGAGACTTGTGTTTGTTTGCTTAACAAGAGTGGCAGAGTCAAATGCTCTCGTGACGCTGCCAAATCTCAGATTCTCGTGTGA 2007 0.4434 MITVNLVCNCTMKPSPKILIGYKNSSILARCHRTITMSMSNNSTTCGLNHDHNTMQFPFHAREFGRVMHGSQQVFGLPSSSFGQSSLIATTTTKRSVSTIAGVDFNFKSRAFSSSMETYENNNGKMVYVKSGLNVNPIMVERVDDGENSVAGEEVSNLEVGEKNEKRENVEEEGEKVEEEETEVEKEAWKLLQEALVTYCDTPVGTVAANDSDDQQPLNYDQVFIRDFIPSALAFLLKGEKEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKTMNLDEGKTEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYGLQERLDVQTGLKMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMVAADENSKNLVGEINNRLSALSFHIREYYWLDPQKMNEIYRYKTEEYSLNATNKFNIYPDQIPLWVTDWVPEGGGYLLGNLQPAHMDFRFFMLGNLWSVVSSLGTPRQNNAILNLIEANWDDLVGQMPLKICYPALEHHEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACMKMERTELAEKAVALAEKRLPRDSWPEYYDTRTARFIGKQARLYQTWTLAGYLASKMLLKSPEMASLLCWNEDFEILETCVCLLNKSGRVKCSRDAAKSQILV 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02341 668 FunFam probable alkaline/neutral invertase B 214 620 - -
Spst1g02341 668 MobiDBLite consensus disorder prediction 159 182 - -
Spst1g02341 668 SUPERFAMILY Six-hairpin glycosidases 188 619 IPR008928 GO:0005975
Spst1g02341 668 Pfam Alkaline and neutral invertase 188 627 IPR024746 GO:0033926
Spst1g02341 668 Coils Coil 160 187 - -
Spst1g02341 668 PANTHER - 117 650 IPR024746 GO:0033926
Spst1g02341 668 MobiDBLite consensus disorder prediction 159 173 - -
Spst1g02341 668 Gene3D - 214 615 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02341 Spst-Chr1 32038520 32041592 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02341 - - gmx:100812691 1120.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02341 1 32038520 32041592 Spst10g01781 10 18209544 18212690 ECH
Spst1g02341 1 32038520 32041592 Spst1g02341 1 32038520 32041592 ECH
Spst1g02341 1 32038520 32041592 Spst10g01781 10 18209544 18212690 PCT