Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst1g02339 | ATGTCTCTGGTAGCAGAAAATATCAAGAGCAGATCAGAGGTGTACCACGGGGACGAAATCTGCCAAGTGAAGTCCAAAGAGCTTCTAAAGGAAATCGCCCTCCCAAACGGTCTCTTACCGCTCAAAGACATCGAGGAGTGCGGCTACGACAGAGAAACCGGCTTCGTCTGGCTCAAACAAAAGAAGAGCTACACTCACAAGTTCGACAAAATCGGTAAACTTGTGTCGTACGCGCCTGAGGTCACCGCCCATGTCGAAAAAGGAAAGATCTCGAAGCTGACAGGTGTGAAGACGAAGGAGCTCTTGCTCTGGATCACGCTCAGTGACATCTACGTCGATGATCCTCCCACCGGCAAAATCACCTTCAAAACCCCCGCAGGGTTGTTCAGGTCTTTTCCTGTCTCCGCCTTCGAGATTGAGGAAGACGCTAAGGAGAGTAAGCGCGTGGCGGACTCCGGCGCGCCGCTGCAAGTCAGAGAGGTCTGA | 486 | 0.5247 | MSLVAENIKSRSEVYHGDEICQVKSKELLKEIALPNGLLPLKDIEECGYDRETGFVWLKQKKSYTHKFDKIGKLVSYAPEVTAHVEKGKISKLTGVKTKELLLWITLSDIYVDDPPTGKITFKTPAGLFRSFPVSAFEIEEDAKESKRVADSGAPLQVREV | 161 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst1g02339 | 161 | Gene3D | - | 7 | 149 | IPR036758 | - | |
| Spst1g02339 | 161 | SUPERFAMILY | At5g01610-like | 8 | 144 | IPR036758 | - | |
| Spst1g02339 | 161 | Pfam | Protein of unknown function, DUF538 | 26 | 138 | IPR007493 | - | |
| Spst1g02339 | 161 | PANTHER | T31J12.3 PROTEIN-RELATED | 13 | 140 | IPR007493 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst1g02339 | Spst-Chr1 | 32032413 | 32032898 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst1g02339 | - | - | gmx:100306660 | 283.493 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Spst1g02339 | 1 | 32032413 | 32032898 | Spst1g02339 | 1 | 32032413 | 32032898 | ECH | |
| Spst1g02339 | 1 | 32032413 | 32032898 | Spst10g01779 | 10 | 18203004 | 18203504 | PCT |