Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01779 ATGGATCTAGTTGCAGAGATCAAAGCCAAAGCAGAGGTGTACCGTGGAGATGAACTCTGCCAAGAAAAGACCAAGTTGCTACTGAAGGAGGTAGGGCTACCCAATGGCCTTTTGCCCTTACAGGACATTGAGGAATGTGGATACGAGAAGGAAAGTGGGTTTGTGTGGCTGAAGCAGAAGAAGACAATAAACCACAAGTTTGAGAAGATTGGGAAGCTAGTGTCCTATGCAACTGAGATCACTGCCTATGTTGAGGTTGGTAAGATAAAGAAGCTCAAAGGTGTGAAGGCCAAGGAGCTCATGGTTTGGGTCACACTGAATGAGATATTTGTTGATGATCCACCCAGTGGCAAGATCACATTCAAGACCCCTACAACGTTGTTCAGGACATTCCCAGTCTCAGCTTTTGTGATTGAGGAGCCGGTTAAGGAAGTGAAGAATAAAGAAGAACAGAAGGAAGTGAAACAAGTTGGTAGTGCTGTTGAAGTCCAAGAGGTTTGA 501 0.4511 MDLVAEIKAKAEVYRGDELCQEKTKLLLKEVGLPNGLLPLQDIEECGYEKESGFVWLKQKKTINHKFEKIGKLVSYATEITAYVEVGKIKKLKGVKAKELMVWVTLNEIFVDDPPSGKITFKTPTTLFRTFPVSAFVIEEPVKEVKNKEEQKEVKQVGSAVEVQEV 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01779 166 Gene3D - 4 148 IPR036758 -
Spst10g01779 166 Pfam Protein of unknown function, DUF538 27 136 IPR007493 -
Spst10g01779 166 PANTHER T31J12.3 PROTEIN-RELATED 21 137 IPR007493 -
Spst10g01779 166 SUPERFAMILY At5g01610-like 6 141 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01779 Spst-Chr10 18203004 18203504 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01779 - - pvu:PHAVU_007G202800g 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01779 10 18203004 18203504 Spst10g01779 10 18203004 18203504 ECH
Spst1g02339 1 32032413 32032898 Spst10g01779 10 18203004 18203504 PCT