Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02227 ATGGGAGAATTAGATCCAAAACCTTTTCAAGATTTGTGCTTGCAAAAGTACAGACATGAGCAATGGCAGGAGATGTCTGCTAAGTTATGTTCATCATGGGAAGAGAATCTGAAGGATCCAACTTGGCATCCTTTCAAAAAAATTGAGGCCAATGGCATACTACAGGAAACATTGGATGAAAATGATGAAAAATTGAAAGCCCTGAAAAGTGAATGCGGTGAAACTGTGTACAAGGCTGTAACAAATGCATTAATGGAAATAGAAGAATACAATTCAAGTGGAAGATATGCAGTTGCTGAAATTTGGAACTGGAAAGAGGGAAGGAAAGCCACTCTAAAAGAAATTATACAGCATATTATCAAGCAATTGAATACTCATAAGCATGTGCAGATGGGGAACCAAAGCTGTGATGAGTCTATGAGCAAGCAAAGCATAGGTTATGTGAACCTGAAGGAGAGGATTGAAAGCCAGAAGCAGAAAATTCTTGACGTGGAGGATAATAATATTTTGAAAGACGGCTGCAAGAGAGAACTCAACAAATCCTTAAAAATAGTTATGAACATGGTTGAGAAGGAAACAATGCTGGATAAGGAATGTCAGAAAGAATTAGAACAGGTGAAAGTTTTGAACTATAAAATGAGCCATGACATTGAATGTATCAAGAAAGAGAATGAGAGGATCACAAAGGAATTGGCAGAGAGTAAGGCATTAAATGATAAGCTGCAGAAGAAACTTACTGAGGAGAATGGGCGGATGATTAAGGAATTAGAAGAGAGTAAAACCCTAAATGATATGCAGCAGAAGAAATTTAGTGAAGAGATTCGAAAGAATGCAATGCAAATTGGCTCTCTTCGGGTGGCTCTGAAGCTAAACAAAGATAATAACGTTTCAGATTTGGACGAGGGACTGAAGGTTAAATATGAACAACTCAAAGCAAAAGTGATTGAGCTGGAAAAACAAACAGAAAACATTCAAAACCTGGAATTTGAGAATCAGGAACTTCAAAAGAAGTTAGATGTGATGAAGCACATGGAAGATGAATTTCTGAATATGGTGAGCGATTTACATATGAATATAGTGGAAAAGGAACGGGCACTTGAAGACTTAGAAGATTTCTACCAATCACTAATCATTAAAGAACGAGAAATCAATGATGAGCTTCAGAGAGCTAGGAAGAAATTGGTGGAAGGAATTGCGGAGACATCAAACCTTCGTGACAATATTGGTGTGAAGAGGATGGGTGAAATAGACACCAAGCCTTTCCTTACAACTTTTAGGAGGAGAAGAAATACCGATAAAGAGGAAGCAGAACAGACAGCTTTGGAAATGTGTTCATTATGGCAAAAGTGTGTGGAGGACCCTGATTGGTATCCATTCAAAATAATAACAAAAGGGGGGAAATCGAAGGAAGTTATAAATGAAGAAGATGGTAGGCTACAAAGGTTGAAAAAGGAAATGGGTTCTGGAGCATTTAACGCAGTGGTGGCAGCTCTGATAGAAATGAGTGAATACAATCCGAGTGGGAGGTTTATTGTAAGAGAAATGTGGAACGAAGGAGAAGGAAGGAGAGCTACATTGGAAGAAGGAATTGAATTCGTGACGAGTCTGTTGCGCCGGCATACATCAAGGCCTGCTCTGCTGCTACAGTTTACAAGAGCGACGAGTGTGGAACGTCTACGAGGCTTAGCGATTCTGCCTAAGCCGAAACGGGGCTGTGATTACAAAGAGAGAGGCTCGAGTGGGAACCCTAATTCCATTCTTAAAGAAGGTGCCGCCATCTCCTTTGCATCAAAAGGAAACACTCCGATCTTGTTTTCCCGTTCTCTCAGTGCGTATAGAAAAAGTCCAGTTGGAACCACGGCTTATTTCCGAGTTGGATTTGCTTAA 1887 0.3985 MGELDPKPFQDLCLQKYRHEQWQEMSAKLCSSWEENLKDPTWHPFKKIEANGILQETLDENDEKLKALKSECGETVYKAVTNALMEIEEYNSSGRYAVAEIWNWKEGRKATLKEIIQHIIKQLNTHKHVQMGNQSCDESMSKQSIGYVNLKERIESQKQKILDVEDNNILKDGCKRELNKSLKIVMNMVEKETMLDKECQKELEQVKVLNYKMSHDIECIKKENERITKELAESKALNDKLQKKLTEENGRMIKELEESKTLNDMQQKKFSEEIRKNAMQIGSLRVALKLNKDNNVSDLDEGLKVKYEQLKAKVIELEKQTENIQNLEFENQELQKKLDVMKHMEDEFLNMVSDLHMNIVEKERALEDLEDFYQSLIIKEREINDELQRARKKLVEGIAETSNLRDNIGVKRMGEIDTKPFLTTFRRRRNTDKEEAEQTALEMCSLWQKCVEDPDWYPFKIITKGGKSKEVINEEDGRLQRLKKEMGSGAFNAVVAALIEMSEYNPSGRFIVREMWNEGEGRRATLEEGIEFVTSLLRRHTSRPALLLQFTRATSVERLRGLAILPKPKRGCDYKERGSSGNPNSILKEGAAISFASKGNTPILFSRSLSAYRKSPVGTTAYFRVGFA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02227 628 PANTHER RIBONUCLEASE P SUBUNIT P38 138 541 IPR045177 GO:0080188
Spst1g02227 628 Coils Coil 147 167 - -
Spst1g02227 628 Coils Coil 300 347 - -
Spst1g02227 628 Coils Coil 373 393 - -
Spst1g02227 628 Coils Coil 51 71 - -
Spst1g02227 628 Coils Coil 217 258 - -
Spst1g02227 628 Pfam XH domain 411 540 IPR005379 -
Spst1g02227 628 Pfam XH domain 1 127 IPR005379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02227 Spst-Chr1 30749836 30759012 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02227 - - gmx:102660631 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02227 1 30749836 30759012 Spst1g02227 1 30749836 30759012 ECH
Spst8g00371 8 3604440 3610872 Spst1g02227 1 30749836 30759012 PCT