Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00773 ATGAGAATTCCCCATGTTCCCTTCCTTTCCTTCATATTCTGTTGCTGCTTCTGGATACACCACACTGTTTACTTCACCGGGGTTTCTGCCCAAATGGTTGAGGATCAACAACAATCTTTGCTCCAACTGAAGAACAGCCTCAAATTCAAGCAAGAAAAATCTCACAAACTTGTGTTCTGGAATTCAAGCATAGATTGCTGCCAGTGGAGGGGTGTTACCTGTGATAAGGAGGGACATGTTATTGGCCTTGACCTGGGCGGAGAATCAATCAATGGTGGATTTGAAAATTCAAGTAGTCTTTTCAATCTGCAAAGTCTCCAGACACTGAATTTGTCTGCTAATAACTTCAGTTCTAACATACCATCCGGATTCAGCAAGTTGAAGAACTTAACATATCTCAATTTGTCTCATGCTGGCTTTGTGGGGCTCATTCCATTGGAGATGTCTTCCCTCACAAGGTTGGTAACGCTTGATATCTCTTCTCTTTCCTTTTTATATGGGCAACCGCTGAAACTTGAAAAGTTAGATCTAATTCTTGTAAGAAACTTCACCATGATTAGACAATTGTTTATGGATGGTGTAAGTATATCAGCTCGGGGAAATGAATGGTGTAATGCTTTGTTGCAGCTACATAGCCTGCAGGAGCTCAGCATGTCAAACTGCAATCTCTCAGGACCCCTTGATCCCTCCCTCATACGACTTCACAACCTATCAATCATTCGTCTTGGTCAAAACAATTTATCATCCCCCGTGCCAGAAACCTTTGCTAATTTTTCAAAACTAACAACCCTTCACCTTAGTTCTTGTGAATTGACAGGAATATTTCCGGAGAAGATCTTTCAGGTAGCAACATTGTCCGAAATAGACTTATCATTTAATCCTTATCTTAATGGATCCTTGCCTGAATTACCTCTGAATGGTCCTCTTCAGACACTGATTGTAAGTGGCACAGGTTTCTCAGGATCAATACCAGCTTCTGTAAATAATCTTTGGCAGTTATCCATTATAGATCTTTCTCATTGTCATTTTAATGGAAGACTACCCAGTTCAATTTCAAGACTCAGGGAACTCACTTATCTGGATTTGTCATTTAATAACTTCACCGGTCCGATTCCATCCTTGAATATGTCCTTGAATCTTATACATTTAGACCTCTCACACAATTATTTCACAGGTTCAATCGCATCTATTCATTTGGACGGCCTAAAATATCTGCTCCAAATTGATTTGCAGGACAATTTCTTCAATGGAAGTCTCCCATCCACTCTTTTTTTTCTCCCATTGCTACGAAGTATACTACTTTCGAACAACAATTTTCAGGGTCAGTTGAATCATGTTTCGAATATCTCTCACTCCATGTTAGAGATCCTTGATTTAAGTTGTAACGATTTAGAAGGGCCCATTCCTACATATATTTTTTATCTCAGATCACTGAGTGTCCTCAAATTATCTTCAAACAATTTAAATGGCACATTGAAGTTAGATTTAATTCAGAGACTTGAAAATCTAACTACTTTAGCTCTTTCGCACAACAACTTTTCAATAGACACAAATCTTAGTGATGTAGGCTTTATGTCTTCCTTCCACAAAATGAGGATAGTTGAGTTGGCTTCCTGCTCTCTAATAGAAGTCCCAACTTTCTTGAGAAACCAATCCAATATAACGACTATAGACCTGTCAAGCAACCATATTCGAGGATCTATACCAACATGGATATGGAAACTTGAATCTCTTCTTCAATTAAATCTTTCTGACAATTTTCTCAGCAGTTTTGAAGGATCTATGCAGAACACTAGTTCCAATTTGAGGATCCTTGACCTTCATGCAAACCAACTTCAAGGGAAGCTTCCAAAATTTCCAGTGCATGCCACTTATTTGGACTATTCAAGCAATAATTTCAGTTTCAGTATTCCATCAGATGTTGCTAGTATGCCGCCCTTAATTTTTCTGTCTCTGTCCAAAAATAGTTTATCCGGGAGTATTCCGCAATTCCTGTGCAATAGTTCAAGTCTGCTAGTTCTGGATGTTTCTTATAATAACTTCGACTGGAAAATTCCGGAGTGCTTAACACAGAGTGAGACACTTGTGGTGTTGAATCTGCAACATAACAAGTTTAAAGGCAGCATTCCAGATAAATTTTCAGTGTCTTGTGCTCTAAGGACTTTGGATCTGAATAGTAATCAATTGAGGGGCCCAATTCCAAAATCTATTGCAAATTGCACATCATTAGAGGTGTTGGATCTTGGAAACAATCAGGTAGATGATGGATTTCCATGCTTCCTAAAGAAAATATCTACACTCCGCGTCCTGGTTTTGAGGGGAAACGAATTTCATGGTCACATTGAATGTTCTGATACCAGTGATTTCTGGCATATGCTTCAAATTGTTGATGTGGCTTTCAACAATTTCAGAGGTTTACTTCCAGCAAAATGCTTCAAAACTTGGAAGGCGGTGATGCTTGATGAGGATCATGATGTATCAAATGTCAATCACATTGGATCTAATATCCTTACATTTGGTGGCATCTATTATCACGATTCTGTAACTCTTACAATTAAAGGTGTGCAGTTGGAGTTTGTTAAAGTTCTGAATCTCGTCACATCTGTTGACTTCTCCTCCAACAACTTTGATGGATCAATACCGGAAGACCTTATGCATTTTACTGGACTTTATGCGCTCAATTTGTCACATAATGGTTTAACAGGCCAAATCCCTTCATCTATAGGGAATTTAAAACGGCTTGAGTCATTGGACCTGTCAAGCAACTATCTTGGTGGTGAGATTCCCACACAGCTTGGAGTTTTAAATTTCCTCTCATACCTGAATCTTTCATTTAATCGTCTGGTGGGAAGAATCCCTGTAGGTAACCAACTTCAAACATTTGATGCATCTTCCTTTGCTGGTAATGCAGAATTATGTGTAAGGCCTTTGAAAACGTGTCCTGATAATTCAGAATCTAAAGTATATGCAGATTCTGGTATTAAATTTGACTGGAGTTTTGTATCAATTGGAGTGGGTTTTGGGGTTGGAGCAGGAATGGTGGTGGCTCCATCATTGTTCTGGAAGAGACTGAACAAATGGAGCAACCATAAAATTGATAAAGCTCTCCTCGTCATTCTTCCAGTGTTGGGTATGACTTGGATACCCATTCATGATGATGATGAGGATGAAACAGAGGAAGATGCTAAGGAAAATAACTCAGACATGGAAGAGGAGTGTGATTACAATGAGATGCAAAATAATTTGGTTCATCAAACGTTTCGAGGGCGGTACTGTGCCTTGTGTTCCAAGCTTCATATCAGTAAGAAGAAGGTAATTCATGATCCAAGGTGTACATGTTACCCCTCACCTCTCATTTCAACATCAACCAATCCAGATTCATATTCTTCTCATTCACATTCATGTTGA 3408 0.3897 MRIPHVPFLSFIFCCCFWIHHTVYFTGVSAQMVEDQQQSLLQLKNSLKFKQEKSHKLVFWNSSIDCCQWRGVTCDKEGHVIGLDLGGESINGGFENSSSLFNLQSLQTLNLSANNFSSNIPSGFSKLKNLTYLNLSHAGFVGLIPLEMSSLTRLVTLDISSLSFLYGQPLKLEKLDLILVRNFTMIRQLFMDGVSISARGNEWCNALLQLHSLQELSMSNCNLSGPLDPSLIRLHNLSIIRLGQNNLSSPVPETFANFSKLTTLHLSSCELTGIFPEKIFQVATLSEIDLSFNPYLNGSLPELPLNGPLQTLIVSGTGFSGSIPASVNNLWQLSIIDLSHCHFNGRLPSSISRLRELTYLDLSFNNFTGPIPSLNMSLNLIHLDLSHNYFTGSIASIHLDGLKYLLQIDLQDNFFNGSLPSTLFFLPLLRSILLSNNNFQGQLNHVSNISHSMLEILDLSCNDLEGPIPTYIFYLRSLSVLKLSSNNLNGTLKLDLIQRLENLTTLALSHNNFSIDTNLSDVGFMSSFHKMRIVELASCSLIEVPTFLRNQSNITTIDLSSNHIRGSIPTWIWKLESLLQLNLSDNFLSSFEGSMQNTSSNLRILDLHANQLQGKLPKFPVHATYLDYSSNNFSFSIPSDVASMPPLIFLSLSKNSLSGSIPQFLCNSSSLLVLDVSYNNFDWKIPECLTQSETLVVLNLQHNKFKGSIPDKFSVSCALRTLDLNSNQLRGPIPKSIANCTSLEVLDLGNNQVDDGFPCFLKKISTLRVLVLRGNEFHGHIECSDTSDFWHMLQIVDVAFNNFRGLLPAKCFKTWKAVMLDEDHDVSNVNHIGSNILTFGGIYYHDSVTLTIKGVQLEFVKVLNLVTSVDFSSNNFDGSIPEDLMHFTGLYALNLSHNGLTGQIPSSIGNLKRLESLDLSSNYLGGEIPTQLGVLNFLSYLNLSFNRLVGRIPVGNQLQTFDASSFAGNAELCVRPLKTCPDNSESKVYADSGIKFDWSFVSIGVGFGVGAGMVVAPSLFWKRLNKWSNHKIDKALLVILPVLGMTWIPIHDDDEDETEEDAKENNSDMEEECDYNEMQNNLVHQTFRGRYCALCSKLHISKKKVIHDPRCTCYPSPLISTSTNPDSYSSHSHSC 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00773 1135 Gene3D Ribonuclease Inhibitor 307 397 IPR032675 -
Spst1g00773 1135 Gene3D Ribonuclease Inhibitor 33 199 IPR032675 -
Spst1g00773 1135 Coils Coil 33 53 - -
Spst1g00773 1135 PANTHER UNNAMED PRODUCT 534 1044 - -
Spst1g00773 1135 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 858 980 - -
Spst1g00773 1135 SMART LRR_typ_2 500 526 IPR003591 -
Spst1g00773 1135 SMART LRR_typ_2 234 257 IPR003591 -
Spst1g00773 1135 SMART LRR_typ_2 258 282 IPR003591 -
Spst1g00773 1135 SMART LRR_typ_2 911 935 IPR003591 -
Spst1g00773 1135 SMART LRR_typ_2 575 597 IPR003591 -
Spst1g00773 1135 SMART LRR_typ_2 475 499 IPR003591 -
Spst1g00773 1135 SMART LRR_typ_2 103 126 IPR003591 -
Spst1g00773 1135 Gene3D Ribonuclease Inhibitor 622 989 IPR032675 -
Spst1g00773 1135 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 591 831 - -
Spst1g00773 1135 SUPERFAMILY L domain-like 34 300 - -
Spst1g00773 1135 SUPERFAMILY L domain-like 599 978 - -
Spst1g00773 1135 Gene3D Ribonuclease Inhibitor 200 306 IPR032675 -
Spst1g00773 1135 SUPERFAMILY L domain-like 520 617 - -
Spst1g00773 1135 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 301 394 - -
Spst1g00773 1135 SUPERFAMILY L domain-like 219 517 - -
Spst1g00773 1135 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Spst1g00773 1135 Gene3D Ribonuclease Inhibitor 519 621 IPR032675 -
Spst1g00773 1135 Gene3D Ribonuclease Inhibitor 398 518 IPR032675 -
Spst1g00773 1135 Pfam Leucine rich repeat 889 948 IPR001611 GO:0005515
Spst1g00773 1135 Pfam Leucine rich repeat 454 513 IPR001611 GO:0005515
Spst1g00773 1135 Pfam Leucine rich repeat 694 752 IPR001611 GO:0005515
Spst1g00773 1135 Pfam Leucine rich repeat 236 294 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00773 Spst-Chr1 10037802 10041209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00773 35 1016 Receptor kinase-like Gene Family AT1G47890 33.792 1.50e-138 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00773 - - gmx:100800048 1608.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00950 4 39659919 39662288 Spst1g00773 1 10037802 10041209 PCT