Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00698 ATGCAAAAGTTTGTTCCTCGTACAACCATGAAAGCCACTGCAATCACCATAAATCCCTCATTCTCTCCACCCTTTTGTTCGTCTGCCACTACCCCTTTTTCTTGTTCCTCATCATCTTCTCCACACCCTGCAAGATTTCAACGTTTGAAGTCGTCAGGAGCAAAACCCATCACTCTTTCTTGCAGAGGAGCATGGTTGCGGTCTTTGCAGGGGTCGAAAGCTCTGAGGGTTAGAAAAAGTTTTGTGCTTGAGGCTGGAAATGTGACCGTGGCAGAGGTTGATTCTAATGGAGAGGGGGAGAACGAGGGTGCTTTGCTTGGCTCCGAGAATGAGAAAAATTCAAAGCCTCGGAGAATTGCTCTCTTTGTTGAGCCTTCTCCCTTTGCATATGTCTCAGGATACAAAAACCGGTTTCAGAACTTTATCAGATGCCTTCGTGAAATGGGAGATGAGGTGATGGTTGTGACAACACATGAGGGAGTGCCCCGCGAATTTTATGGTGCCAAAGTAATCGGATCTTGGAGCTTTCCCTGCCCTTGGTATCAGAAGGTACCCCTCTCGTTGGCACTTAGTCCAAGAATAATTTCAGAGGTAGCCCGGTTTAAGCCTGACATAATCCATGCATCATCGCCAGGCATAATGGTTTTTGGAGCTCTTATCATTGCAAAACTATTGTGTGTTCCAATTGTCATGTCCTATCACACCCATGTACCTGTGTACATTCCTAGATATACCTTTAGCTGGTTGGTGAAACCCATGTGGTTGATCATAAAATTTCTTCACAGAGCAGCTGATCTAACTCTGGTACCATCTGCTGCCATTGCGGGGGATCTCCTAGCAGCTAGAGTCACAGCAGCTAACAAGATTCGGCTTTGGAACAAGGGTGTTGACTCTGAAAAATTCCATCCCCAATACCGCTCCTATGAAATGCGGTTAAGACTAAGCAATGGTGAACCTGACAAACCCTTGATAGTTCATGTTGGACGGCTTGGAGTAGAGAAGAGTTTAGATTTTCTCAAAAGGCTCATGGATAGGCTTCCTGAAGCCCGAATTGCTTTTGTTGGCGATGGACCATACAGGGAGGAGCTAGAGAAAATGTTTGAAGGTATGCCTGCAGTGTTTACTGGAATGCTAGGAGGGGAAGAACTGTCCCAAGCATATGCTAGTGGAGATGTGTTTGTGATGCCTTCAGAGTCAGAGACACTTGGTCTTGTAGTTTTGGAGGCCATGTCTTCAGGGATACCTGTGGTGGCAGCACGTGCTGGAGGTATTCCTGATATAATCCCTGCAGATCAAGATGGTAAAACCAGCTATCTGTATAATCCTAGAGATCTTGAAGACTGCTTGAGCAAACTAAGGCCCCTTTTGCACGACAAAGTGTTGAGAGAAACCGTGGGAAATGCTGCACGTGAAGAGATGGAGAAGTATGATTGGAAGGCAGCCACACGAAAGATTCGCAACGAACAATACAATGCTGCCATTTGGTTCTGGCGCAAGAAAAGGGCTCAACTATTGAGACCCTTCCAGTGGCTGGCAAAACGTTTTTCCCCATCACCTCAAGTCAACTAA 1569 0.4614 MQKFVPRTTMKATAITINPSFSPPFCSSATTPFSCSSSSSPHPARFQRLKSSGAKPITLSCRGAWLRSLQGSKALRVRKSFVLEAGNVTVAEVDSNGEGENEGALLGSENEKNSKPRRIALFVEPSPFAYVSGYKNRFQNFIRCLREMGDEVMVVTTHEGVPREFYGAKVIGSWSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIAGDLLAARVTAANKIRLWNKGVDSEKFHPQYRSYEMRLRLSNGEPDKPLIVHVGRLGVEKSLDFLKRLMDRLPEARIAFVGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVAARAGGIPDIIPADQDGKTSYLYNPRDLEDCLSKLRPLLHDKVLRETVGNAAREEMEKYDWKAATRKIRNEQYNAAIWFWRKKRAQLLRPFQWLAKRFSPSPQVN 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00698 522 Gene3D Glycogen Phosphorylase B; 313 476 - -
Spst1g00698 522 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 119 486 - -
Spst1g00698 522 Gene3D Glycogen Phosphorylase B; 118 312 - -
Spst1g00698 522 FunFam Sulfoquinovosyl transferase SQD2 118 313 - -
Spst1g00698 522 CDD GT4-like 118 490 - -
Spst1g00698 522 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 114 501 - -
Spst1g00698 522 FunFam sulfoquinovosyl transferase SQD2 314 476 - -
Spst1g00698 522 Pfam Glycosyltransferase Family 4 136 299 IPR028098 -
Spst1g00698 522 Pfam Glycosyl transferases group 1 322 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00698 Spst-Chr1 9136973 9141883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00698 77 439 Glycosyltransferase AT5G01220 78.512 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00698 K06119 - gmx:100807850 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00698 1 9136973 9141883 Spst1g00698 1 9136973 9141883 ECH
Spst1g00698 1 9136973 9141883 Spst4g01301 4 49660194 49664763 PCT