Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00656 ATGGGACATCTCACGCTTGCTCCAGCATGGGTTTTCATTCTGTTAGCTGTGTCTTCTGTGGCTTCTGCGGGTATTGTGGAATACACATTCAATGTGGCGAACATGACGATTCATAGGTTATGTAACAACCAAGTTATAACTGCAGTGAATGACCAATTTCCTGGACCTACTATCCGAGTGCGAGAGGGTGACACTCTTGTGGTCCATGTGTTGAACAAGTCACCATACAACATTACCCTGCATTGGCATGGAATATTTCAACTTCTAAGTGGATGGGCAGATGGTCCTGAATATGTCACTCAGTGTCCAATTCGTCCCAATCATAACTTCACTTACAGATTCAAAATCGAAGGACAAGAGGGAACTCTTTGGTGGCATGCTCATGCATCATTCCTTCGTGCAACAGTCCATGGTGCACTTTTTATCCATCCTAGGAGAAACCATCCTTATGCATTTCCTAAGCCCTACGACCAAGTTCCCATCGTATTAGGTGAATGGTGGAAATCCAACGTTATGGAGTTTAATGACCAAACACTTACCCCATCCGTTGCTTTTATGATCAATGGCCTGCCTGGTGACCTATACAATTGCTCTCAAGATCAGATGTTCAAACTGAAGGTTAAGCCTGGTAGGACCTACTTGTTAAGGATAATCAACACCAACCTCATAAGCCAAATGTTCTTCAAGGTTGCGAATCACAGGCTTACTGTGGTCGCCATTGATGCAGTGTACACAACACCTTATGCCACCAATGTGGTGGTGATTGCTCCTGGTCAAACCACCGATGTGCTTCTCAAAACAAATCAACCAATTGGTTCTTATTACATGGCTGCGTCAATTTATAACACGATTCTAGCAGCATTTGACAACACCATAACCAGAGGCCTTGTTGTCTATGAAGGATCCAAATCAACCACTCCTTTGATGCCAATCATGCCACTTTCAAATGACACAAAAACGGCTAATCAGTTCTACACTGAACTAACTGGGCTTGTAGATAGGCCTCACTGGCGCCAATGTCCAAATGAAGTGGATGAGAAAATGTTCATTGCATATGGGTTGAATCTAGCACCTTGTCCACAGAATGAGACATGTTTTGGCCCGCAACAGACTAGAGTGTCTGCCAGCATGAACAATGAATCTTTTGTTCTTCCTAGTCAGAAGAAAATGTCCATGTTGGAAGCATTCTACTATAATGAAAGTGGCATATACACCAAGGATTTTCCAAATAAGCCTCCCCTAGAGTTTGACTACACCAACACAAATAATAGCCTTGACTTCTCTCTCCTATTTGCACCCAAGTCAACCAAGGTGAAGAAGTTGAAGTACAATTCGACTGTGGAGATTGTGTTGCAAAACACTGCGTTGCTTGATCCAGAGAACCACCCCATACACATTCATGGATTCAACTTCTTCGTCCTAGCTCAGGGATTTGGAAACTTCAATGCTACGCGAGACAGGGTAAAATTTAATTTTGTGAACCCCCAGATGCGAAATACAATTGCTGTGCCTCAAGGAGGGTGGGCTGTGATCAGATTCAAAGCCAATAATCCAGGTATATGGTTGATACACTGCCATGTCGACAATCATCTGTCATGGGGGATGAGCACGGCTTTCGAAATTGAGAATGGACATACTCCATCTTCTACCTTGCCTCCCCCACCTCCTGATCTACCCACTTGCTGA 1686 0.4383 MGHLTLAPAWVFILLAVSSVASAGIVEYTFNVANMTIHRLCNNQVITAVNDQFPGPTIRVREGDTLVVHVLNKSPYNITLHWHGIFQLLSGWADGPEYVTQCPIRPNHNFTYRFKIEGQEGTLWWHAHASFLRATVHGALFIHPRRNHPYAFPKPYDQVPIVLGEWWKSNVMEFNDQTLTPSVAFMINGLPGDLYNCSQDQMFKLKVKPGRTYLLRIINTNLISQMFFKVANHRLTVVAIDAVYTTPYATNVVVIAPGQTTDVLLKTNQPIGSYYMAASIYNTILAAFDNTITRGLVVYEGSKSTTPLMPIMPLSNDTKTANQFYTELTGLVDRPHWRQCPNEVDEKMFIAYGLNLAPCPQNETCFGPQQTRVSASMNNESFVLPSQKKMSMLEAFYYNESGIYTKDFPNKPPLEFDYTNTNNSLDFSLLFAPKSTKVKKLKYNSTVEIVLQNTALLDPENHPIHIHGFNFFVLAQGFGNFNATRDRVKFNFVNPQMRNTIAVPQGGWAVIRFKANNPGIWLIHCHVDNHLSWGMSTAFEIENGHTPSSTLPPPPPDLPTC 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00656 561 Gene3D - 363 561 IPR008972 -
Spst1g00656 561 Gene3D - 16 144 IPR008972 -
Spst1g00656 561 Gene3D - 154 320 IPR008972 -
Spst1g00656 561 Pfam Multicopper oxidase 408 543 IPR011706 GO:0005507|GO:0016491
Spst1g00656 561 CDD CuRO_1_LCC_plant 28 144 IPR034288 GO:0005507
Spst1g00656 561 Pfam Multicopper oxidase 158 301 IPR001117 -
Spst1g00656 561 CDD CuRO_2_LCC_plant 159 299 IPR034285 -
Spst1g00656 561 ProSitePatterns Multicopper oxidases signature 2. 524 535 IPR002355 GO:0005507
Spst1g00656 561 SUPERFAMILY Cupredoxins 24 168 IPR008972 -
Spst1g00656 561 NCBIfam laccase 25 561 IPR017761 GO:0046274|GO:0048046|GO:0052716
Spst1g00656 561 Pfam Multicopper oxidase 32 146 IPR011707 GO:0005507
Spst1g00656 561 ProSitePatterns Multicopper oxidases signature 1. 519 539 IPR033138 -
Spst1g00656 561 SUPERFAMILY Cupredoxins 152 335 IPR008972 -
Spst1g00656 561 SUPERFAMILY Cupredoxins 368 561 IPR008972 -
Spst1g00656 561 CDD CuRO_3_LCC_plant 403 544 IPR034289 GO:0005507
Spst1g00656 561 PANTHER MULTI-COPPER OXIDASE 33 549 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00656 Spst-Chr1 8647399 8650544 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00656 K05909 - cave:132191931 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00656 1 8647399 8650544 Spst4g01305 4 49885975 49889242 PCT