Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01412 ATGAGAACAAGCAACCACTTGATCGGTGTGCTAAACTTCCTAACGTTCCTGTTGTCGGTTCCTATCCTAGGTGGTGGGATATGGCTGAGCAGCAGAGCCAACAACACGGACTGTCTGAAGTTTCTGCAGTGGCCGTTGATCATAATCGGCGTCAGCATCATGGTGGTGTCGCTGGCGGGTTTCGCCGGGGCCTGTTACCGCAACACGTTCCTGATGCGGCTGTACCTGGTGGTGATGTTCGCGGTGATTGCGGTGCTGATTGGGTTCATCATATTCGCGTACGTGGTGACGGACAAAGGGTCGGGTCGGAGGATGATGAACCGGGCCTACTTGGATTACTATTTGGAGGACTATTCGGGGTGGTTGGAGGAGCGCGTGGCGAGTGATAGTTACTGGGGGAAGATTGGATCCTGCATTAGGGATTCTAAAGTGTGTGCGAGGATGGGAAGAACCATTAATGGAGTTCCTGAAACTCCTGATATGTTCTACCTCAGAACCCTCACTCCTATTCAGTCTGGTTGCTGCAAGCCCCCCACAGAATGTGGCTATATCTATCAGAATGAGACTGTGTGGAACCTAGGATCAGGATTGATGGGAAGCACTGCAGATTGCACCAGGTGGAGCAATGACCAAGAACTGCTTTGCTATGCCTGTGATTCCTGCAAGGCTGGTGTGCTGGCAAGTCTGAAGAAGAGTTGGAGGAAAGTGTCAGTGATCAACATTGTTGTTATGATCCTCCTTGTGATTGTTTACATAGTTGCTTATGCAGCATATAGAAACAACCGCAGGATGGATAATGATGAACCCTATGGTGAAGCCAGGATGACAAAGGCACAACCTAGTGCCTTTCATCTTTAG 858 0.4988 MRTSNHLIGVLNFLTFLLSVPILGGGIWLSSRANNTDCLKFLQWPLIIIGVSIMVVSLAGFAGACYRNTFLMRLYLVVMFAVIAVLIGFIIFAYVVTDKGSGRRMMNRAYLDYYLEDYSGWLEERVASDSYWGKIGSCIRDSKVCARMGRTINGVPETPDMFYLRTLTPIQSGCCKPPTECGYIYQNETVWNLGSGLMGSTADCTRWSNDQELLCYACDSCKAGVLASLKKSWRKVSVINIVVMILLVIVYIVAYAAYRNNRRMDNDEPYGEARMTKAQPSAFHL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01412 285 PRINTS Transmembrane four family signature 39 65 - -
Spst11g01412 285 PRINTS Transmembrane four family signature 66 94 - -
Spst11g01412 285 PRINTS Transmembrane four family signature 6 29 - -
Spst11g01412 285 Pfam Tetraspanin family 6 253 IPR018499 GO:0016020
Spst11g01412 285 PANTHER TETRASPANIN-8-RELATED 1 264 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01412 Spst-Chr11 38510514 38514131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01412 1 277 Miscellaneous Gene Families AT5G60220 71.841 1.19e-131 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01412 - - gmx:100798336 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00579 5 4824330 4827869 Spst11g01412 11 38510514 38514131 PCT