Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01362 ATGCTCCCTCGTAAATCACTCCTCCTTTCCCTCTCCCTCGCCACTCTTCTCCTCTTCTCGTCCCTCTCCCTCACTCTCTCCAACAAACCCTCACTAAACGACACCAAAACCAACCAAGACGACAACGATGATGAAGATCTCAGCTTCCTCGAGGAGCCCCATGACGCCGCCGACACTTCGCACCACGCCCACTTCCCAGATCCCGACCACTTCGACAACGACGATGACGACGACTTCGGCGACTTCTCCGGGTTTGACTCCCCGTCCGAGGAGGCTTTCAAGGAGCCTGCGGTCGACGACAAGGACGTCGTCATTTTGAAGGAGCGCAACTTCACCACCGTCATCGAGAACAACCGCTTCGTCATGGTCGAGTTCTACGCCCCTTGGTGCGGCCACTGCCAAGCCCTCGCGCCTGAGTACGCCGCCGCAGCCACCGAGCTCAAGCCCGATGGCGTCGTTCTGGCCAAGGTCGACGCCACCATCGAGAACGAATTGGCGCACGAGTACGACGTCCAGGGCTTCCCCACCGTCTTCTTCTTCGTCGATGGCGAGCACAAGCCTTACACTGGCCAAAGAACCAAAGATGCTATAGTGACATGGATTAAGAAGAAAATAGGACCTGGTGTATCCAACATAACCACGTTGGATGAAGCTGAACGCATATTGACCGCCGAAAGTAAAGTTGTTTTGGGTTTCCTGAACTCTTTAGTTGGTGCCGAGAGTGATGAGCTAGCTGCGGCGTCAAAGCTTGAGGATGGTGTCAACTTTTATCAAACTGTGGTACCTGATGTGGCAAAGCTTTTCCATATTGATGCAAGCGTTAAACGCCCTGCTTTGATCTTGCTCAAGAAAGAGGAGGAGAAACTGAACCATTTTGATGGAAAATTTGTAAAATCTGAAATAGCTGAATTTGTATCCTCCAACAAGCTTCCTTTAGTTACAACGTTTACAAGAGAAAGTGCCCCAGAAATCTTTGAAAGTCAAATAAAAAAACAGTTGTTGCTGTTTGCGACTTCAAATGATACTGAGAAGTTTGTTCCAGTATTTAAAGAATCTGCAAAACATTTTAAGGGGAAGCTGATCTTTGTTCTTGTGGAAATGGATAGTGAAGATGTTGGAAAGCCTGTTGCAGATTATTTTGGTATCACTGGGAATGGCCCCAAAGTACTTGGATACACAGGAAATGATGATGGAAGAAAATTTTTGCTTGATGGAGAGGTGACTGTTGACAAATTAACGGCATTTGGAAATGATTTTCTTGAAGAAAAGCTAAAACCTTTCCTCAAGTCAGATCCAGTTCCTGAAAGCAATGATGGTGATGTGAAAATAGTTGTTGGGAATAACTTTGATGAAATTGTCTTGGATGAGTCAAAGGATGTTCTGCTTGAGATTTATGCTCCCTGGTGCGGCCACTGCCAAGCTCTGGAACCAACATACAACAAACTTGCTAAACATCTTCGCAGCATCGAGTCTATTGTTATAGCCAAGATGGACGGAACGACAAATGAGCATCCCAGGGCCAAGGCTGATGGATTCCCCACTCTTCTCTTCTACCCAGCAAGAAACAAAAGTTCTGATCCTATTCCTGTTGATGTGGATCGTTCAGTGGTAGCCTTTTATAAGTTCCTCAGGAAACATGCATCAATCCCATTCCAGCTCCAGAACCCGGCAACAACTTCTAAACCCAGGAGCGAGAGTTCTGATGTCAAGGAGAGCCAGAGCAGCAGCGCTGATGTGAAGGACGAATTAATTTTCCATTCACTATCCTTAAAATCTGACATGATTGAAGGAACAGTTCTTGAGGTGATCAAAAACCCTCCGATCCTCTCGCATCCCGAGGCCTCACCCCTTATAAACCCACTCATCATTTTCTGTCCTCACACTTTTCCAGATCTAACACCCATTTTCCGTTCCGTTCAAAACAGTTCTTCTTTCTCTCTCGCACACTTTCACACTTTCGTCTTCTTTCGTCATCGCAGTTTCAATTTCATCTCAGATCCAACATTGTTCACCACAAATTCAATTCGTTCCATGGCCAATCCTGCACCCGCCAGATTCTCGGCTCTTCTTCTCCTCCTTTCTTTGTTAGTCAACACCGCTTCCGCCACCGATTCTCCGACTCTGCCGCCGGAGTTATCTCCCTCTTCTCCTCCTTCACATTCTCCTTCTCCTCATGTCGCTCCCGCTTCCCACCCTTCCCCGGCGGAATCACCCCAATCTCCATCTCCGACGCCTAATAGTAACGATTCGCCGCCGTCTCCTACGCCTCAGAACTCTCATTCTCCTTCGCCGGCTCCGTCTCCGGACGGTGAAGATAACGATGGAGTCAACCGCGCCGACTTGGCTGGCAACAGCGGTAAATCTTCCTCCGGAGGAATGAGTTCCGGCAAGAAAGCGGGAGTGGCGGTGGGAGTAATCGTCGCCGCTGGCGTGGTTGTGTTGGGAGCGTTCGTGTACAAGAAGCGCCGCCAGAACATCCAACGGTCACAGTACGGATACGCAGCGAGGAGAGAACTTCTTTAG 2523 0.4875 MLPRKSLLLSLSLATLLLFSSLSLTLSNKPSLNDTKTNQDDNDDEDLSFLEEPHDAADTSHHAHFPDPDHFDNDDDDDFGDFSGFDSPSEEAFKEPAVDDKDVVILKERNFTTVIENNRFVMVEFYAPWCGHCQALAPEYAAAATELKPDGVVLAKVDATIENELAHEYDVQGFPTVFFFVDGEHKPYTGQRTKDAIVTWIKKKIGPGVSNITTLDEAERILTAESKVVLGFLNSLVGAESDELAAASKLEDGVNFYQTVVPDVAKLFHIDASVKRPALILLKKEEEKLNHFDGKFVKSEIAEFVSSNKLPLVTTFTRESAPEIFESQIKKQLLLFATSNDTEKFVPVFKESAKHFKGKLIFVLVEMDSEDVGKPVADYFGITGNGPKVLGYTGNDDGRKFLLDGEVTVDKLTAFGNDFLEEKLKPFLKSDPVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRSIESIVIAKMDGTTNEHPRAKADGFPTLLFYPARNKSSDPIPVDVDRSVVAFYKFLRKHASIPFQLQNPATTSKPRSESSDVKESQSSSADVKDELIFHSLSLKSDMIEGTVLEVIKNPPILSHPEASPLINPLIIFCPHTFPDLTPIFRSVQNSSSFSLAHFHTFVFFRHRSFNFISDPTLFTTNSIRSMANPAPARFSALLLLLSLLVNTASATDSPTLPPELSPSSPPSHSPSPHVAPASHPSPAESPQSPSPTPNSNDSPPSPTPQNSHSPSPAPSPDGEDNDGVNRADLAGNSGKSSSGGMSSGKKAGVAVGVIVAAGVVVLGAFVYKKRRQNIQRSQYGYAARRELL 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01362 840 MobiDBLite consensus disorder prediction 52 70 - -
Spst11g01362 840 MobiDBLite consensus disorder prediction 703 797 - -
Spst11g01362 840 SUPERFAMILY Thioredoxin-like 212 320 IPR036249 -
Spst11g01362 840 Pfam Thioredoxin 103 203 IPR013766 -
Spst11g01362 840 Pfam Thioredoxin 441 524 IPR013766 -
Spst11g01362 840 CDD PDI_a_PDI_a'_C 441 543 - -
Spst11g01362 840 ProSitePatterns Thioredoxin family active site. 461 479 IPR017937 -
Spst11g01362 840 Gene3D Glutaredoxin 309 434 - -
Spst11g01362 840 FunFam Protein disulfide-isomerase 92 204 - -
Spst11g01362 840 Gene3D Glutaredoxin 435 549 - -
Spst11g01362 840 FunFam Protein disulfide-isomerase 436 549 - -
Spst11g01362 840 SUPERFAMILY Thioredoxin-like 308 438 IPR036249 -
Spst11g01362 840 SUPERFAMILY Thioredoxin-like 436 548 IPR036249 -
Spst11g01362 840 CDD PDI_b'_family 320 420 - -
Spst11g01362 840 MobiDBLite consensus disorder prediction 554 575 - -
Spst11g01362 840 FunFam protein disulfide-isomerase A2 205 309 - -
Spst11g01362 840 ProSitePatterns Thioredoxin family active site. 122 140 IPR017937 -
Spst11g01362 840 FunFam Protein disulfide-isomerase 310 435 - -
Spst11g01362 840 Gene3D Glutaredoxin 90 205 - -
Spst11g01362 840 ProSiteProfiles Thioredoxin domain profile. 81 206 IPR013766 -
Spst11g01362 840 Pfam Thioredoxin-like domain 244 417 - -
Spst11g01362 840 CDD PDI_b_family 209 308 - -
Spst11g01362 840 ProSiteProfiles Thioredoxin domain profile. 427 548 IPR013766 -
Spst11g01362 840 NCBIfam protein disulfide-isomerase domain 107 204 IPR005788 GO:0003756
Spst11g01362 840 MobiDBLite consensus disorder prediction 710 763 - -
Spst11g01362 840 NCBIfam protein disulfide-isomerase 101 583 IPR005792 GO:0003756
Spst11g01362 840 PRINTS Thioredoxin family signature 129 138 - -
Spst11g01362 840 PRINTS Thioredoxin family signature 121 129 - -
Spst11g01362 840 PRINTS Thioredoxin family signature 170 181 - -
Spst11g01362 840 SUPERFAMILY Thioredoxin-like 97 206 IPR036249 -
Spst11g01362 840 MobiDBLite consensus disorder prediction 30 70 - -
Spst11g01362 840 MobiDBLite consensus disorder prediction 554 573 - -
Spst11g01362 840 CDD PDI_a_family 104 201 - -
Spst11g01362 840 PANTHER PROTEIN DISULFIDE ISOMERASE 10 567 - -
Spst11g01362 840 Gene3D Glutaredoxin 206 308 - -
Spst11g01362 840 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01362 Spst-Chr11 38119495 38131137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01362 K09580 - gmx:100790223 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00554 5 4511104 4514961 Spst11g01362 11 38119495 38131137 PCT