Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01342 ATGATAGAGAAGACACAGTGTGAGAAAAAGGGAAACATGGAGGGTGAAGAAACTGAGATGAAACAACAATCCAGGTTCAAGAGGATTTGTGTGTTCTGTGGAAGCAGCCCTGGGAACAAGAGTAGCTATAAGGATGCTGCTATTGAGCTTGGGAAAGAGTTGGTGTCAAGAAATATTGATCTGGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTGGTTTCTCAAGCTGTTTATGATGGGGGTCGCCATGTAATTGGAGTTATTCCCAAGACACTCATGCCAAGAGAGATTACTGGAGAGACAGTGGGGGAAGTGATGGCAGTAGCAGACATGCATCAAAGAAAAGCAGAGATGGCTCGCCACTCTGATGCCTTTATTGCCTTACCCGGTGGCTACGGTACACTTGAGGAGCTTCTTGAGGTGATAACTTGGGCACAGCTTGGCATCCATGATAAACCAGTGGGGTTGCTGAATGTAGATGGATACTACAATTCCTTGTTGTCTTTCATAGACAAAGCCGTGGAGGAAGGCTTCATTAACCACAAAGCTCGCCACATAATTGTATCAGCCCCATCATCAAAAGAGCTTGTCAAAAAGCTTGAGGAGTATTTCCCACAACATGAAAGAGTTGCCTCTAAGCTAAGCTGGGAAACTGAGCAGATAGATTACTCCTCAAGTTGTGACATGTCTAGGTGA 699 0.4521 MIEKTQCEKKGNMEGEETEMKQQSRFKRICVFCGSSPGNKSSYKDAAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMPREITGETVGEVMAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFINHKARHIIVSAPSSKELVKKLEEYFPQHERVASKLSWETEQIDYSSSCDMSR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01342 232 Gene3D - 15 203 - -
Spst11g01342 232 MobiDBLite consensus disorder prediction 1 20 - -
Spst11g01342 232 Pfam Possible lysine decarboxylase 71 201 IPR031100 -
Spst11g01342 232 NCBIfam Rossman fold protein, TIGR00730 family 27 204 IPR005269 GO:0009691|GO:0016787
Spst11g01342 232 PANTHER LOG FAMILY PROTEIN YJL055W 17 227 - -
Spst11g01342 232 SUPERFAMILY MCP/YpsA-like 25 204 - -
Spst11g01342 232 FunFam CASP-like protein 16 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01342 Spst-Chr11 37931997 37935669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01342 K22522 - gmx:100815735 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00538 5 4348924 4352402 Spst11g01342 11 37931997 37935669 PCT