Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01333 ATGACGAATGGTTCCAGTCGCGTAGCGGAGAAAGGACTAATCACAAGGTCTTCTAGAGAGACATTGTCGAAGAAAGTGGCTGCCACCTTCTCGAACACTCCGAATCGCAAGTCCGAGCGGCTTGAGAAGAGGACACCACCGTCACCTGCGGGCAGGATGGATCAGAAGAGGAGTACGGAGACGCCAAGTCCGTTGAGGAGATCTGAGAGAAGGAGGACAGCTTCTCCTTCATATCCTTCTCCTTCCAGGGGTTCGGGTTCCTGTTCGAGGACACCGCAAAAGAGGCATTGTATTGGAAAACAGTTGGTATTTGAAGCCAGCGAGAATGGGGACAAAGAAGACGAGGAACGTGGCGTGGAAGCTTCTTCGAGACCCAGAACTAGGAGTATTGTGTATGGGATGGATAGGTCAACTAAAAAAGGTGATGATGGGGGTGGAGGCAAGATTGATGGCTGTCTTAAAAAAGGGAATTGTTTAGATTCTGCCAATGATGATAAGGATATACGGCTGCCTGAAGATGCCACTGGTAAAAAGATGAGAGTTGAGCCTAAGTTGAGTGAGCCAGTGAAAGAACTATCATGTAATAACGCAACTGGAAATCGATTGATAAAGTCTAACACTGCAAGTTGTGAGCCTTGTGGGACACCTGAAAAGGTTCAGTTTGATTCAAGCAAAGAGGAGAGATTGCCAATTTTTGGGTCATTGGATTACGTATCAAATGAAAATTTTATTAGGAGATGTATTGAACATGATAAGGATAAAAAGTCAATATCTCCTAAGAGAAAAAGAACAATAGTGGACATGCATTCAGATACTTCTACTATGTTGGTGGACAACGACAACAACCTGAGTTTGATTAAGGATACTCGCCCGTCAAGGATGTGCAGCAATGTTGTGGAGACCAGTGGGTCATGTTCCAAAAGGATAAGGCCTATTGACATGCAGATTTCCTTATCAGATGAGAAAAGAGATTGGAGGAAATCAACCAATAATGTTGATCAGCCTTCTTCAAAATTATCTACTAGGAACAGGGAAGGACAGCTAAAGAGCTGTTTACAACATATCACTCATGCAGCAAGAATTATTGTAGCTGATGATGTTTTGCATGGGTGCACCATCAGGTGCTTTTTGCTGGAAATTCTGAAGCTCCAGTTGTTCATGTCTTTTAGTCCTTGTTTAGTTCAACTGCTTGTGTTTGCAATAGTATTTCTTGGAAAAATAGATGGTCTAGAGTTAGTTGGAATCTCCGGCATTACATGGCCATTTGAGTTGGTGGGCAGTGCCATTTCAGTTGCACGTTCATTGGGACCTCAAGGAAACGCTGTAGAAACTGAGAAAATAAGGAAACAACAGAGGAGCTTACATCTTTTACTGAAGCCAGAGATAGCAAATCTTTGTCAAATTCTGCATCTCCCTGTGTTGTGCAAAGAAATAGAAATGCAAGCCCTATCGCACATTGATGATGAAGAAGTTGACATAATGAGAAAATGTGATAAGGATGACGTGAAGAGTATGGTTCAAAATTGTCTTGAATATACTATGAACAATTACCAGATCTGTACAGAACCATTGCCAATATTACAGGCTTTTCAACTATCTCTGTGTTTGACTGCTGCTGCTTTGCTAAATCACAAACTCAACTTCGAAGCTTCCCTTTTGCTTGCAAAGCAGCACTTGAATTTTGACTGCAAGAAAGAAGTGGTAGATGAAATCAATTCAAGGCTCTGGGATCTGAAGGAAAGTTTTTTATTGCTCACAGGAAACTCTAACGTTGCTGGCTATGCAAAGGCTTCTCAATCGTCAAGTGGGGCTTCTTCATATATGGAAGTGACACCAGAGGCTGAATTGGTAAAAATCGATAATTCTATAAATATTAAAAGTGTACAAAAGCGTAAAAGACAGTGGAAAAAGCTACTTCTGATGCAACGGGAAGAGAAGATAAGGCTGAAAAAAGATATTGAGAATGAAAATACTGAATTTCGGAGAAAGCACCAAATAGAGTGGGAAGCTATTCAATCATGTTCTCCCAATGATTTGACTAATGAAGGGAAGCTTCAGTTTGAAAGTGAATACACGAAAAGAACTAGAGAATTGAATAGGCAGCAAGAAATACGTCTCAAGGATCTTGAGGCAAAGCAATTAAAATCTAGGCTGATGTTCCAGGAGTCTTTGGCACCAGATGAATTGTTAAACCCAGTTGGTTCGAACAAACTAGGGACTATGGTCAAATCCTTACAGATTTCTGATCGAGATCAGCATCATGATGCTTCAAAAGCCCTTGTGCCTGATCATGTTGCCAAAGGAAAGGGTTTCAATGATATAGTAGAAGTCATGGCAAGGACTGAATCTGGGGTTGGATTATCAGAAGCTTCTGATGCCAATGCCTCTGTAGTTGCATCATGCAGTAGCACAGTTGAACTGCAAACTAGTCCAGTCAAACATGCTGATGCTAATGATATGGACATAGTCACTTCAAAAGATGAAGTTTTATCTGGAATCAAGTGCAATAATATTGTTGCAAATGAATATCAAAGTCAGGGAAATATTATCTCTAAGTATTTCAAATCCGGAGAGCGATATTCTGAAGGAGCTATTAAAGTGCCAAACAAAGAGGAAGGGTGTGTAAATTTTAGTCATGAATCTCATAATGATTTTGGGAATGATCCTATAATGCAGGCTCTGCCTTCATCTAATGAAGACATATGTCATGGGGACACACTAGGTGTTTGCAGTGGGGAGGTGGCTCCTTCAGTCTATAACACTAGCAGTTCTACTAATGATCTTGTTGAAATTCCTTCTTCTAGGCAAGGGGAGCTTAATGGGATTGTACAAATCAGGCCTGTTTGTGGATCGTCAATAGAAGTTGAGGCTAATGGTTCCAATGATGGTGCAAAGAATATGGCTGTCTTGAATTCTCAATCATCCGAAGAACATATTCCATATGTAAATACCTTGTGCGCACCAAATTGTGAGACTACTGCACAAATCCATGACGCTGATAACAATTATAGTTCAAATCAAGCTGACACTCTGAACTCATCTTTGAATGATGAAAGAATTTCCTCCTGGAATTCAAAATCACCTCAAGATCATGTCCATAATAAAAATGGCACATGGGTTCTAAATTGTGAAAAATTTGCACGTGTGGATGGCAATGATTCAGATAATTTTATTCTTAATTCTACTTTGGTTGAGAGAAATGTTGATAGGAACGTAGTATTAAATAGAGATGCACATGTGGGAATACTTGATGCTCTCAATTTGACTTCATCCACTGAGCAAATAGCTCGAGATGCCCAATATGTCTCAGTTTTAGATAGTGTGTTATCCAGACCATGTGGAGCCAATATTTCTAGTAATTGCTCTGATGCTAATGCTATTATTCTTTCAAATCAACCTTCTACAGAGAAACAAAATCATCATGGAGTCTCATCAAGCATAACTGTTGGACAAATTCCAGTTGAAGTTTCAGAAACTAATGAGAGGGCCACTTTAAATGTATTAGATGGGGAGGAAGCTGTGTCTCTGTCAATGCCCGACACAGTCAATTATCCTGACAATGTAATTCCTCAGAACTCTTCATCCATGGATCAATTACCTAATGGAGATCCAGTATTAGATGGCAATTTATCATCAGGGCCTAGTACTACAAGCCCAAACAATGGCCAGACCCTACCTGATGAACAAGTTTCTGTCCTGGTGCCAGGAAATAGCCATGGGGAAGCTGAATGTCAATTAACACGCAATATGGATAAAAGGGCCACATTAGACCAACAGGAAGGATTATGTAAAACCATGACGGAAAACAGTTTGACCCAGGAGACTCCAGTTGATTTCATGGAGCCTCTAGAACAAGTGCAGCCATTGTCATCTGTAAAGTCTCCACCTGACCTGGATACTTCTAGAGAAATGCAGAACAACGTAGTATCTAGTCCTGTTGATGTTGTACCAGATAATCAATCCATTAGTGATTCACCGGTCATGGAGCCTCCAAAAGAGGTGCAATTTCCTTCTGCAGGTGTCCCCTCTTCCAACCGGGACCTATGTAACTTGCCTTTGATGAGCAGAACTGAAGACCATCCATACAATGAAGATGATCTCCTCAACCACACTCCTGGAACATTAATTGAGATTCAAAATCAAGCTATTGTGCAACACCCCTCAAATTCAGACCAGCAGGAAGGAGTATGTAGAAACATGAGCAGAAACAGTTTGTCCCAGGGGACTCCAGTATCTAGATCAGTTGATGATCTCATGGAGCCTGTAGAACAAGTGCAAACATTACCATCTTTAGAGTCCCCAGATGACCGGAATACTACAATAGAAATGCAGAACAGTCTGGTATCGAGTTCTGTTGATATTGTACTAGCTAATTTATCTATTAATGATTCACTGGTCATGGAGCCTCCCGAGAAGGAGGGGCAGTTACCTTCTGCAGGTATCCTTCCTTCCAATCGAGACCTATCTAACTTGCCTATGGTGACTGGAACTGAAAACCAGCCATCCAATGAAGATGATGATTTCCCCAACCACACTCCTAAGACATCAATTGAGATTCAAAATCAAGCTGTTGGGCAATGTACCTCAATTGCGGAACATGATTCATGTTGTCAAGTTGTACATCCAGCCTCAAATATGGACTTTGTTTCACTTATGCTTGCTGGAGTCAGACAACAGTCTTCAGACACAAGAAATTTGTCAACTCTCCCAGAGATTAATCATCATCCTATACAACCAGCAAGCCAATCAGATTCCAGGATACATTTTCCCCATGATCTACTTAACTATGAATTGGAAAGACTACATAAACAGACAGAGGAAAATATTAAAAATTATGCAAAAAAGCAGCTATCCCAGTTGAAAGTTGATTTGGCTAAGGACCTCGAGAAAGTTACCAGGAAGTATGACATTATACGTAAGGAGAATGAGGCTGAATTACAGAAAGTAACGACGGACCTGGATAAACAAAATAGCATAGTTCATGTAAATATGAAATTGGCAGAGGCTTGGGCTAAATTCATGGATGATGATCTAACTGGTACGTTAAGATTGCAGAAAGATACAAGTTCTGTACAGCAATTATTTCAGCGTGCAAGTCCGCAAAATGCCACTCGGCCCAATATGGTTGCTAGTCCATCTACTTGTGGGCATCCTGCAGCAAGCTTGCAGAGTTTCTATGCCACAACTACCTCGCAGACTACGGTACCACCAATACAAGCCACGTACAATACTCCTGGAACATTCTCCATTGCTTCTTCAAGATTACAACGTATCAACTCCCTCTCTTCACCCTTGGGAGATCTTCAAACTGGTGGGGAGATACGTGCCCCTGCACCACATCTCCACCCTTATAGACCCACAACATCCCTCCCAGCCTCCAATCTCTGTACAGCTCTGCATGGGAGACCAAGTCTGCCTGCACCCTGTAATGGTCCTGTAACTTCTCCCCCATTTTCTCACCAGACACCCCAGCCAACACCAGCAGCACCCTTTCCTTTTCATGGCCATTGGCCAGTGAGTACAGGTGGTTCATCCTCACCTAATTTACCTGCCATTAATACTCCCTCTAATGCTAACAGTCAACATGGTATATATCTGCCAAATGTTCCGCCTCATATGCCAGATTTTGCTTCGGCGAACAGATCTAAATATTTCAAAAGTAGTAGTACGTCGGCTACATCACCTGATGTAGTCTGTTTATCAGATGATGAATGA 5715 0.4149 MTNGSSRVAEKGLITRSSRETLSKKVAATFSNTPNRKSERLEKRTPPSPAGRMDQKRSTETPSPLRRSERRRTASPSYPSPSRGSGSCSRTPQKRHCIGKQLVFEASENGDKEDEERGVEASSRPRTRSIVYGMDRSTKKGDDGGGGKIDGCLKKGNCLDSANDDKDIRLPEDATGKKMRVEPKLSEPVKELSCNNATGNRLIKSNTASCEPCGTPEKVQFDSSKEERLPIFGSLDYVSNENFIRRCIEHDKDKKSISPKRKRTIVDMHSDTSTMLVDNDNNLSLIKDTRPSRMCSNVVETSGSCSKRIRPIDMQISLSDEKRDWRKSTNNVDQPSSKLSTRNREGQLKSCLQHITHAARIIVADDVLHGCTIRCFLLEILKLQLFMSFSPCLVQLLVFAIVFLGKIDGLELVGISGITWPFELVGSAISVARSLGPQGNAVETEKIRKQQRSLHLLLKPEIANLCQILHLPVLCKEIEMQALSHIDDEEVDIMRKCDKDDVKSMVQNCLEYTMNNYQICTEPLPILQAFQLSLCLTAAALLNHKLNFEASLLLAKQHLNFDCKKEVVDEINSRLWDLKESFLLLTGNSNVAGYAKASQSSSGASSYMEVTPEAELVKIDNSINIKSVQKRKRQWKKLLLMQREEKIRLKKDIENENTEFRRKHQIEWEAIQSCSPNDLTNEGKLQFESEYTKRTRELNRQQEIRLKDLEAKQLKSRLMFQESLAPDELLNPVGSNKLGTMVKSLQISDRDQHHDASKALVPDHVAKGKGFNDIVEVMARTESGVGLSEASDANASVVASCSSTVELQTSPVKHADANDMDIVTSKDEVLSGIKCNNIVANEYQSQGNIISKYFKSGERYSEGAIKVPNKEEGCVNFSHESHNDFGNDPIMQALPSSNEDICHGDTLGVCSGEVAPSVYNTSSSTNDLVEIPSSRQGELNGIVQIRPVCGSSIEVEANGSNDGAKNMAVLNSQSSEEHIPYVNTLCAPNCETTAQIHDADNNYSSNQADTLNSSLNDERISSWNSKSPQDHVHNKNGTWVLNCEKFARVDGNDSDNFILNSTLVERNVDRNVVLNRDAHVGILDALNLTSSTEQIARDAQYVSVLDSVLSRPCGANISSNCSDANAIILSNQPSTEKQNHHGVSSSITVGQIPVEVSETNERATLNVLDGEEAVSLSMPDTVNYPDNVIPQNSSSMDQLPNGDPVLDGNLSSGPSTTSPNNGQTLPDEQVSVLVPGNSHGEAECQLTRNMDKRATLDQQEGLCKTMTENSLTQETPVDFMEPLEQVQPLSSVKSPPDLDTSREMQNNVVSSPVDVVPDNQSISDSPVMEPPKEVQFPSAGVPSSNRDLCNLPLMSRTEDHPYNEDDLLNHTPGTLIEIQNQAIVQHPSNSDQQEGVCRNMSRNSLSQGTPVSRSVDDLMEPVEQVQTLPSLESPDDRNTTIEMQNSLVSSSVDIVLANLSINDSLVMEPPEKEGQLPSAGILPSNRDLSNLPMVTGTENQPSNEDDDFPNHTPKTSIEIQNQAVGQCTSIAEHDSCCQVVHPASNMDFVSLMLAGVRQQSSDTRNLSTLPEINHHPIQPASQSDSRIHFPHDLLNYELERLHKQTEENIKNYAKKQLSQLKVDLAKDLEKVTRKYDIIRKENEAELQKVTTDLDKQNSIVHVNMKLAEAWAKFMDDDLTGTLRLQKDTSSVQQLFQRASPQNATRPNMVASPSTCGHPAASLQSFYATTTSQTTVPPIQATYNTPGTFSIASSRLQRINSLSSPLGDLQTGGEIRAPAPHLHPYRPTTSLPASNLCTALHGRPSLPAPCNGPVTSPPFSHQTPQPTPAAPFPFHGHWPVSTGGSSSPNLPAINTPSNANSQHGIYLPNVPPHMPDFASANRSKYFKSSSTSATSPDVVCLSDDE 1904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01333 1904 Coils Coil 1595 1648 - -
Spst11g01333 1904 Coils Coil 692 712 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 1324 1343 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 106 123 - -
Spst11g01333 1904 PANTHER HELICASE PROTEIN MOM1 12 486 IPR039322 GO:0031507
Spst11g01333 1904 MobiDBLite consensus disorder prediction 321 343 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 133 147 - -
Spst11g01333 1904 Gene3D - 1591 1672 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 1807 1904 - -
Spst11g01333 1904 Coils Coil 639 663 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 1 147 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 1208 1227 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 1839 1864 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 1881 1897 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 19 35 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 59 73 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 1177 1227 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 1468 1487 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 1492 1511 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 36 50 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 74 94 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 1180 1200 - -
Spst11g01333 1904 MobiDBLite consensus disorder prediction 1809 1832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01333 Spst-Chr11 37847775 37859751 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01333 - - vun:114170579 1880.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01333 11 37847775 37859751 Spst11g01333 11 37847775 37859751 ECH
Spst5g00532 5 4288609 4315366 Spst11g01333 11 37847775 37859751 PCT