Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01299 ATGGAGAAGCTCTTAAACCAGAGAAAAGTGAAGAGTGCTTTAGGTGTAAGGGATGACTTGCAGTTTGTTTCATGCAGTTCAACTGTGTATGATGCTTTGGAGCTAGACTCCATGAGAAACCTGGATGTGGGGATTCCTGCTCTTCTTGAGGATGGAATCAGGATGCTTGTGTATGTTGGGGAAGAAGATCTCATATGCAATTGGCTTGGGAATTTAAGGTGGGTTAATGCCATGGAGTGGTCAGGCCAGAAGGCCTTTGGAAGATCTCCTACAGTGAAATTTAAGGTTGATGGTGCAGAAGCAGGGTCTCTTAATAGCTATGGACCTCTCTCTTTCCTCAAGGTACACGGTGCTGGGCACTTGGTCCCTATGGATCAACCAAAAGTTGCACTTGAGATGTTGAAAAGTTGGATGGGAGGGAAACTGGCGGGAATACAAGCATGGCGTGACTAA 453 0.4592 MEKLLNQRKVKSALGVRDDLQFVSCSSTVYDALELDSMRNLDVGIPALLEDGIRMLVYVGEEDLICNWLGNLRWVNAMEWSGQKAFGRSPTVKFKVDGAEAGSLNSYGPLSFLKVHGAGHLVPMDQPKVALEMLKSWMGGKLAGIQAWRD 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01299 150 Gene3D alpha/beta hydrolase 1 138 IPR029058 -
Spst11g01299 150 ProSitePatterns Serine carboxypeptidases, histidine active site. 110 127 IPR033124 GO:0004185
Spst11g01299 150 SUPERFAMILY alpha/beta-Hydrolases 3 141 IPR029058 -
Spst11g01299 150 Pfam Serine carboxypeptidase 2 139 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01299 Spst-Chr11 37401380 37403605 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01299 K16298 - gmx:100806118 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01299 11 37401380 37403605 Spst11g01299 11 37401380 37403605 ECH
Spst5g00505 5 3995242 3998614 Spst11g01299 11 37401380 37403605 PCT