Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01298 ATGAAGTTGGCAATGACATCAACACTTTTCAAAGTTTCTCTGTCTCTTGTCTTGATGCTCTTCCTCTCACTTTCTTCTTCTGAAGCAGTTTCTAGTGTCAAACATGACCATGCTTACCCACCACAGTCACATTCACAAGCAGAAAAACTGATAAGAAGCCTTAACCTATTTCCAAAGGATCCAGTTAACATTATTAAAGGTGACCATGCTGGTTTTGTTCCTGGAAATATCGTGGAGAAGAAGTTCTCATTTCTTGGTGATTCTGGGTCTTCTGTTGAAGATCTTGGCCACCATGCAGGCTACTATTCACTTCCTCATTCCAAAGCTGCTAGGATGTTCTACTTTTTCTTTGAATCACGAGACACTAAGGATGATCCTGTTGTGATATGGTTGTCTGGAGGACCAGGTTGCGGCAGTGAAATAGCTCTGTTTTATGAGAATGGTCCTTTTCATATTGCCAATAACTTGTCTCTTACATGGAATCCTTATGGCTGGGACCAGGCATCAAATATTATATTTATTGACCAACCTACAGGGACAGGTTTTAGTTACTCTTCTGATGATACTGATCTTCGTCACGATGAAACGGGCGTTAGCAATGATTTATATGACTTCTTGCAGGAATTTTTCAAGGCTCATCCTGAGTTGGTTAAGAATGAGTTTTATATCACTGGAGAATCATACGCTGGACATTATATTCCCGCACTTGCATCCTGGATTAACCAAGGAAATAAAATCAAACAAGGAATCCATATAAACCTCAAGGGTTTTGCTATTGGTAATGCGTTTACAAATCCTGCAATTCAATACCAAGCATACCCAGATTTTGCGTTAGACAAAAGGATAATTACCAAGGATGAGCATGATGATATCAGCAAGTTAATCCCAAACTGCGAAGAAACCGCTAAAGCTTGTCGTACGAGTTCTTTACCTTTCGTCACTCGCATCCTTTTTAGCTGA 960 0.399 MKLAMTSTLFKVSLSLVLMLFLSLSSSEAVSSVKHDHAYPPQSHSQAEKLIRSLNLFPKDPVNIIKGDHAGFVPGNIVEKKFSFLGDSGSSVEDLGHHAGYYSLPHSKAARMFYFFFESRDTKDDPVVIWLSGGPGCGSEIALFYENGPFHIANNLSLTWNPYGWDQASNIIFIDQPTGTGFSYSSDDTDLRHDETGVSNDLYDFLQEFFKAHPELVKNEFYITGESYAGHYIPALASWINQGNKIKQGIHINLKGFAIGNAFTNPAIQYQAYPDFALDKRIITKDEHDDISKLIPNCEETAKACRTSSLPFVTRILFS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01298 319 PRINTS Carboxypeptidase C serine protease (S10) family signature 209 234 IPR001563 GO:0004185|GO:0006508
Spst11g01298 319 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 184 IPR001563 GO:0004185|GO:0006508
Spst11g01298 319 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 173 IPR001563 GO:0004185|GO:0006508
Spst11g01298 319 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 91 302 IPR001563 GO:0004185|GO:0006508
Spst11g01298 319 FunFam Serine carboxypeptidase 3 112 171 - -
Spst11g01298 319 ProSitePatterns Serine carboxypeptidases, serine active site. 223 230 IPR018202 GO:0004185
Spst11g01298 319 SUPERFAMILY alpha/beta-Hydrolases 96 310 IPR029058 -
Spst11g01298 319 Gene3D alpha/beta hydrolase 77 315 IPR029058 -
Spst11g01298 319 Pfam Serine carboxypeptidase 95 308 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01298 Spst-Chr11 37398536 37401094 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01298 K16298 - gmx:100798795 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01298 11 37398536 37401094 Spst5g00505 5 3995242 3998614 PCT