Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01024 ATGAGTCGCTACGATTCCAATCCCTTCGATGAAGAGGTCGAGGTTAATCCCTTTGCGGATGGACAAGCTAAAGGAAAAGGGTCAGGGCAATCAAGTTATGGCGGAGGTGCATTTTATACCACTAACTCTGGAAGTGTTCCCTCTGCAAATTCAAAGCTCTCACCCCTTCCTCCGGAGCCTTATGATCGTGGGGCAACTATTGACATCCCCCTTGGTAGCTCAAAGGACGTCAAAGCAAAGGAGAAGGAACTTCAAGCTAGAGAGGCTGACTTGAGAAGAAGGGAACAGGAACTAAAACGAAGGGAAGATGCCGTAGCACGAGCTGGAATAGTTATAGAGGAAAAAAATTGGCCACCTTTTTTTCCCATCATTCATCATGACATTGGAAAGGAAATACCAATACATCTTCAAAGGATCCAATACATTGCATTTTCAACATGGTTGGGTTTGGTTTTGTGTCTTGTATGGAATATTGTGGCAGTTACCACTGCTTGGATCAAAGGAGAAGGTCCAACAATCTGGTTTCTTGCAATTATCTATTTTATATCTGGTGCTCCAGGATCCTATGTGTTGTGGTATCGCCCTCTTTATCGGGCTATGAGGACTGACAGTGCTCTGAAATTTGGCTGGTTTTTCTTGGTTTATATTCACATTGCCTTCTGCATTTTCGCTGCAGTTGCTCCACCAATTATCTTCAAAGGAAAATCTCTGACTGGTATTTTGGCTGCGATTGACGTGTTGGGTGACAATGCATTGGTTGGGATATTCTACTTTATTGGGTTTGGACTTTTCTGCCTTGAGTCAGTGTTGAGCATTTGGGTTATACAGCAAGTATATATGTACTTCCGCGGCAGTGGCAAGGCTGAAGTTTTGAAGCGTGATGCTGCGAGAGGGACAATGATGGCAGCCCTATAA 915 0.4404 MSRYDSNPFDEEVEVNPFADGQAKGKGSGQSSYGGGAFYTTNSGSVPSANSKLSPLPPEPYDRGATIDIPLGSSKDVKAKEKELQAREADLRRREQELKRREDAVARAGIVIEEKNWPPFFPIIHHDIGKEIPIHLQRIQYIAFSTWLGLVLCLVWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVLWYRPLYRAMRTDSALKFGWFFLVYIHIAFCIFAAVAPPIIFKGKSLTGILAAIDVLGDNALVGIFYFIGFGLFCLESVLSIWVIQQVYMYFRGSGKAEVLKRDAARGTMMAAL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01024 304 Pfam SCAMP family 114 284 IPR007273 GO:0015031|GO:0016020
Spst11g01024 304 MobiDBLite consensus disorder prediction 25 52 - -
Spst11g01024 304 Coils Coil 74 101 - -
Spst11g01024 304 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 301 IPR007273 GO:0015031|GO:0016020
Spst11g01024 304 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01024 Spst-Chr11 34437221 34443836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01024 3 304 Miscellaneous Gene Families AT1G11180 67.742 5.29e-145 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01024 K19995 - gmx:100796729 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00840 5 7718376 7727493 Spst11g01024 11 34437221 34443836 PCT