Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00872 ATGGATGATGCTTTCAAATTCGTCATCCAAAACCCTGGACTCAACTCTGAAGCAAATTACCCTTACAAGGGTGTTGATGGAACCTGCAATGCCAATGCAGCATCCCGCCACGCAGCTACCATTACCGGGTATGAGGATGTCCCTGCAAACAATGAGAAAGCACTGCAAAAGGCTGTGGCTAATCAACCAGTGTCTGTGGCCATTGATGCCAGTGGCTCTGACTTCCAGTTTTACACGAGTGGTGTCTTCACTGGTTCGTGTGGAACTGACTTGGACCACGGTGTCACTGTGGGATATGGTGTCAGTGGTGATGGAACTGAGTATTGGTTGGTTAAGAACTCATGGGGAACAGAGTGGGGTGAAGAAGGGTACATTAGGATGCAAAGGGGTGTGGATTCTGAGGAAGGACTTTGTGGCATAGCGATGCAAGCATCTTACCCTACTGCATAA 450 0.4867 MDDAFKFVIQNPGLNSEANYPYKGVDGTCNANAASRHAATITGYEDVPANNEKALQKAVANQPVSVAIDASGSDFQFYTSGVFTGSCGTDLDHGVTVGYGVSGDGTEYWLVKNSWGTEWGEEGYIRMQRGVDSEEGLCGIAMQASYPTA 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00872 149 Pfam Papain family cysteine protease 1 148 IPR000668 GO:0006508|GO:0008234
Spst11g00872 149 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 1 142 IPR013128 GO:0008234
Spst11g00872 149 SUPERFAMILY Cysteine proteinases 1 149 IPR038765 -
Spst11g00872 149 FunFam Uncharacterized protein 49 148 - -
Spst11g00872 149 SMART pept_c1 1 148 IPR000668 GO:0006508|GO:0008234
Spst11g00872 149 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 108 127 IPR025661 -
Spst11g00872 149 Gene3D Cysteine proteinases 1 149 - -
Spst11g00872 149 CDD Peptidase_C1A 1 147 IPR039417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00872 Spst-Chr11 32784662 32785111 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00872 - - gmx:102666929 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00872 11 32784662 32785111 Spst11g00872 11 32784662 32785111 ECH
Spst5g00911 5 8503308 8505079 Spst11g00872 11 32784662 32785111 ECH