Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00780 ATGGAGTCGATCATGTGCAAAGCTCTGGAGTACACTCTCAAGTACTGGCTCAAATCGTTCTCACGAGATCAGTTCAAGTTGCAGGGTCGCACCGCTCAGCTTTCCAATCTAGATTTGGATGGGGATGCGGTGCACTCCAGCATTGGATTTCCACCAGCGCTTAGTGTCACCACCGCCAAAGTTGGCAAACTGGAGATCATGATAGAGCCGATCATCGTGCAAGTTGATAGGCTAAATTTGGTTCTTGAAGAGAATTCTAATTTTCAGCCATCTGAAAATCCAACCAGTCGCACGACATCAAGTGCCTCCTCAAAGGGTAGCGGCTATGGTTTTGGTGATAAGATTGCAGATGGAATGACTGTACAGATTCGTGTGGTTAATCTCTTACTCGAAACTCGTGGAAGTTCTTGCTGCCAAGGAGGAGAAACATGGACACCACCTGTGGCATCTATCACCATACACAATCTTATATTGCATACCACAAATGAAAGTTGGGAGGTTGTAAATCTTAAAGAGGCACGAGAATTCTCCAGTAATAAGAAGTATATATACGTCTTCAAAAAACTAGAATGGGAATCTATGTCTATTGATCTTTTGCCTCATCCTGACATATTCACGGATTCTACTATAGGCCACTCTCAAGAGGGAGCAACCTTGAGAGATAATGACAGTGCAAAGAGAGTATTGTTTGGAGGCGGGCGAATAATAGAAGGAATATCAGGAGAAGCATTTATCACAGTTCAGAGAACTGAGCTGAACAGTCCATTTGGACTTGAGGTTCAGTTTCATGTCACTGAAGCTGTTTGTCCTGCATTAAGTGAACCAGGACTCCGTGCGCTTCTCCGCTGTATACAAGGATTAAATATCTGTCTAAATAGGGGAAAAGTAGATGTCAAGGCTCAGCAGCGATCAACTGAAGCTGCCAGGCATTCTGTTGTCTCAATTGTTGTGGACCATATATTTCTTTGCCTTAAAGACTCTGAGTTCCAGCTTGAGCTTTTAGTGCAGTCCTTCCAATTTTCTCGGGCCAGTCTTTCTAAGGGAGATAGTGATAGTAACTTGACCAGAATTACAATTGCAGGAGTATTTTTAAGTTGTTTTTGGGATAAAAAGGCTGTTTACAATTTGCAAGTGTTTGTTGAGACAGTAGCTGAAATATCTAGAAGCTTTTGCCCTTCCATATATCCACTAAAAGAACAGCAATGGCAATCAATTGTGGGAACTCCTCTAATATGCCTCCATTCTATTCAGATCGTGCCTTCTCCTCTTCCACCATCCTTTGCTTCTGAAACTGTTATTGATTGTCAACATCTAATGATTCACCTTCAAGAAGAATCCTACCTTAGGATATCATCATTCTTAGCTGATGGTATTGATGTCAATCACAGTGACATTTCGCCAGATTTCTCAGTAAAATCTTTTAATTTCACTCTGAAGGGTCTGGATCTTACAGTTCCTTCGGATAAGACCCAACTGGATATTTCTAAAACCAATATGAACAATGCAGTCAAGACCTCCTTTGCTGGAGCAAGGCTACATATTGAAAATCTTTTCTTTTTAGATTCACCGTCATTGAAACTGAGAATACTGAACCTCGAGAAGGATCCTGCTTGCTTCTGTCTTTGGAAGGATCAACCAATTGATGCCAGTCAAAAGAAGTGGACTGCGGGAGCATCCCAGCTTACTTTATCTCTGGAAGCAAGTACTGACAAGCTTGGACAGCAGAGCTCTCTCGGATGGACATCTGGATTGTGGAGATGTGTTGACCTGATAGGTGCTCGCATAGAAGTAGCTATGGTAACTGCTGATGGTAGTTCCTTGTTAAAGGTTCCTCCTCCCGGGGGTATTGTGAGGGTTGGTATTGCTTATGAACAATGTCTATTCAACACTTCAGTTGAACAGTTTTTTTTTGTCCTGAATTTCTATGATTATTTTGGGAGAGTTAGTGAGAAAATAGCCATAGCTGGAAAAAAGAAACAATTGAAAGATGTTAGAAACAAATCTTTTAGTGGAAATCTGATGGACAAGATTCCCAGCGATACTTCTGTAAGTTTGACAATAAACAATCTCCAACTTCAATTTCTCGAGTCGTCTTCTGTGAATTCTGAGGGAATGCCTCTAGGACAGTTTGTCGGGGATGATTTATATGTTACTGCCACTCATAGAACGCTAGGTGGTGCTATTGCTGTTTCATCCACATTAAATTGGGAGAGAGTTCAAATAGATTGTGCGGAATCTGAAGAACACTTGGCATGTGAAAATGACCCATATTTTAGTACTGGAGAAACTGTTCCCTCAATAAGTGACAATGGACACCCTAAACTGAGACCTGTTTTCTGGGTGCATAACAAAAAGCAACTACTTAATGAAAATGAACTTTCATCACCCTTCCCCTTCCTAGACATACGTATGGAGCAAGTAATACCATTTTGTGTAGTAGACACGGAGTCACATACTTTAAATGTCTCAGCTTTTGTATCTGGTGTTCGTCTTGGTGGGGGAATGAACTACTCTGAGGCCCTCCTGCATCGATTCGGAATACTAGGGCCTGATGGTGGTCCAGGGAAGGGGTTGTCTAAAGGATTCGAGAACTTACAAACTGGACCATTGGCAAAACTTTTTAAGACAACACCTCTGATTGTTGATAATTTAGAAAATGTTGAATCTATGAAAGAAGGGAAAGATACCAGTTTTCCACACTTGAAGAAGCCAGATGTTGTGGACATAACTATAGAGTTGAGAGACTGGTTATTTGCTCTTGAAGGCACACAAGAGGTGGCTGAAAGATGGTGGTTCTCAAGCCATGATTCAAACAGAGAAGAGATGTTTTGGCACACAACTTTTCATACTTTGCGAGTAAATGCAAAAAGTTGCCCAAAGAATGTTTCAAAGAGAAAAGCACAATCACACAGAATACAACTGTATCCTGTGGAACTGGTTACGGTTGGAGTTCAAGGGTTGCAGATCATGAAGCCTCATATCCAAAAGGACATTCCTTCATCAATTATAATTGCAAATGGAGTTAAACAATTCAGTGACAAAGTTGAGGGACTTGATCTTGAAGTAGGCATGATATTGTGTGAGGATAATGAAGATGGTGAAATGGTTAATTGGGAAGTGGAGAATCTCAAGTTTTATATAAGACAACCGATTGAGGCAGTTGTAACCAAGGAAGAGGTCAAACACTTCATTTTTCTATGCAAGTCTGAAATTGATTCTGTGGGCCGAATAACCGCTGGAATTTTACAGCTATTTAAGCTAGAAAGTTCTGTCGCCCAGTCTGTAATTCATCTGCTTGGCAACCTAGGAAGTGAGGACATTGACAAGAATTTTTCTCCTGAGAAGCCTGGCGTAGATACTAGCTTTTCTAGCCGAGGCCTCTCTCTGATACAAAATCCAACAAATGAAAGCACAAGAAAAACTATGGAACCAACATTAATTTTGCTTGAGGAAGCAGTTGCCGATTCACAGTCTAAGATTAATGCTTTGATATCTGACATTGGTACTTCTGAGTCTTCTTTTCAGCACCTTACTGTTGTGAAAGAACTCGGTCAAAAGATTGAGTCGATGCACGGTTTAGTCAGTGATCCTCTAAGCTCAGATGTGGAAAGTGTTATGCAAAAACTTGATTCTGTTTCCCACTGA 3645 0.4104 MESIMCKALEYTLKYWLKSFSRDQFKLQGRTAQLSNLDLDGDAVHSSIGFPPALSVTTAKVGKLEIMIEPIIVQVDRLNLVLEENSNFQPSENPTSRTTSSASSKGSGYGFGDKIADGMTVQIRVVNLLLETRGSSCCQGGETWTPPVASITIHNLILHTTNESWEVVNLKEAREFSSNKKYIYVFKKLEWESMSIDLLPHPDIFTDSTIGHSQEGATLRDNDSAKRVLFGGGRIIEGISGEAFITVQRTELNSPFGLEVQFHVTEAVCPALSEPGLRALLRCIQGLNICLNRGKVDVKAQQRSTEAARHSVVSIVVDHIFLCLKDSEFQLELLVQSFQFSRASLSKGDSDSNLTRITIAGVFLSCFWDKKAVYNLQVFVETVAEISRSFCPSIYPLKEQQWQSIVGTPLICLHSIQIVPSPLPPSFASETVIDCQHLMIHLQEESYLRISSFLADGIDVNHSDISPDFSVKSFNFTLKGLDLTVPSDKTQLDISKTNMNNAVKTSFAGARLHIENLFFLDSPSLKLRILNLEKDPACFCLWKDQPIDASQKKWTAGASQLTLSLEASTDKLGQQSSLGWTSGLWRCVDLIGARIEVAMVTADGSSLLKVPPPGGIVRVGIAYEQCLFNTSVEQFFFVLNFYDYFGRVSEKIAIAGKKKQLKDVRNKSFSGNLMDKIPSDTSVSLTINNLQLQFLESSSVNSEGMPLGQFVGDDLYVTATHRTLGGAIAVSSTLNWERVQIDCAESEEHLACENDPYFSTGETVPSISDNGHPKLRPVFWVHNKKQLLNENELSSPFPFLDIRMEQVIPFCVVDTESHTLNVSAFVSGVRLGGGMNYSEALLHRFGILGPDGGPGKGLSKGFENLQTGPLAKLFKTTPLIVDNLENVESMKEGKDTSFPHLKKPDVVDITIELRDWLFALEGTQEVAERWWFSSHDSNREEMFWHTTFHTLRVNAKSCPKNVSKRKAQSHRIQLYPVELVTVGVQGLQIMKPHIQKDIPSSIIIANGVKQFSDKVEGLDLEVGMILCEDNEDGEMVNWEVENLKFYIRQPIEAVVTKEEVKHFIFLCKSEIDSVGRITAGILQLFKLESSVAQSVIHLLGNLGSEDIDKNFSPEKPGVDTSFSSRGLSLIQNPTNESTRKTMEPTLILLEEAVADSQSKINALISDIGTSESSFQHLTVVKELGQKIESMHGLVSDPLSSDVESVMQKLDSVSH 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00780 1214 MobiDBLite consensus disorder prediction 86 106 - -
Spst11g00780 1214 PANTHER UNCHARACTERIZED 1 1194 IPR026728 -
Spst11g00780 1214 Pfam N-terminal region of Chorein or VPS13 1 97 IPR026854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00780 Spst-Chr11 31554966 31574149 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00780 - - gmx:100782617 1652.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00988 5 9554046 9562862 Spst11g00780 11 31554966 31574149 PCT