Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00779 ATGGGGACACTTGTGACCTCAGCTAAGGGTGTGATGATTGAATTTAAGGGTGAATTTGAAGAATTAGTGGTAAACCTTTTGTATTTGTGCGTGTGGATAGCTGCTATTTTCATCTCTTTGATTTTTGGGATGAGTAGGAATGATGCCCAGAAACAAGGGCACCTTCTTGGAGGTGTTACCACTGGTAGTGGTGGCAAAACCAATAGCAATGGCTTCATCCCCAGCTCCTTTCGTACTCTCTCTGGTTACCTGAAGAGTGTTTCATCAGGTGCTTCTACAGTTGCTCGGTCAGCTGCTGCCTCATTTGCATCATCCATTTTGGATAAGCATGGTGATCCTGACCGTGATCAGGCCAGCAGGAGTTCAATTATTGGGGTATATGGCCTCTGGCTTCTTGATCTGATTTTTGTTATTTGGGCTGGGTTTGACATACTAGAGGGCCAGGGAGGAGTCGTTCTGCAAGTACTTCTTCTAGGCTATTGGTCTGGCTTCCAGGTTTGGAATGTTGATGATTCAAATAATGTCTGTGACCTAGTTTCCAGACATGATGGTCCTGTATCTTTTATGCAAATGGTACCAAGTCCAATTGTATCAAACAGACTGGTGGACAAGTTTGCAGACAAGCGTCCATTGTTGGCAGTATGTATGGATGATTTATTGGCCGGACGAGGCAAAATAGAAGATGAGTTGGTTGCCACTTGCAATGGGAGCACTTTAAACCATCATGACCAAGTGAATGGAAACTATCTGTCAACTACTGTTCATTTTTATTCTATGAGGTCCCAATCATATGTTCATGCACTAAAGTTTAGATCAGCTGTTTATTCTGTTAGATGTAGTTCTCGAGTAGTTGCTGTTTCTCTAGCCACTCAGATACACTGTTTTTCTCCCACAACTTTAGTAAGGGAGTATATTTTACTTACCAATCCTGTAGTCATGAGCTGTCCTGGTTCTGGAGGCATTGGCTTTGGACCACTTGCAGTGGGTCCTAGATGGCTGGCCTATAGTGGAAGTCCTTCTGTAATTGCCACTTCTGGGCGCGTCAGCCCACAGCATTTGACACCTTCTGCAAGCTTTCCTAGTTTTTCTTCAAATGGGAGCTTGTTTGCACACTATGCCAAACAGTCTAGCAAGCATCTTGCTTCTGGGATTGTGACCCTTGGGGATATGGGGTATAAGAAACTTTCCAGTTACTGCTCAGAACTTCTCCCAGATAATAATGGTTCTATACAATGTGTAAATTCTAGCCCAAAAGGAAATGGAATCATTCATGGCCATTCAACAGATGTGGAAAACATTGGGATGGTCATTGTAAGAGATATAGTCAGTAAAAATGTCATTGCCCAGTTCCGGGCCCACAAGAGTCCTATTTCAGCTTTATGCTTTGATCCTAGTGGTACCATCTTAGTGACTGCTTCTGTTCAGGGGCATAACATTAATGTTTTTAAGATAATGCCGGGATATAAGAGAGTGTCAGCATCTGATGCTGGCCCTTCTTATGTTCATCTCTACAGGCTGCAACGTGGCTTGACAAATGCAGTTATTCAAGATATCAGTTTTAGTGTTGATAGCCGGTGGATTATGATTAGTTCCTCAAGGGGCACTAGTCATCTGTTTGCTATAAATCCTCAAGGAGGGCCTGTAAATATTCTGTCCTGTGACAATAGTTCAACAGAAAAAGATGGCGGATTGAAGGTCATGACTGATCAAGCTGTTCAATGGCCTCATAGTTCAGCTTTAGAAATTTGTAAACAGCAGAGTCTCTGCGCTGCTGGTTCTCCTATCACACTTTCTGTTGTAAGCAGAATTAGGAATGGATCTAATGGCTGGAGAAGCTCGGTAACTGGTGCTGCTGCAGCTGCAGCTGCAACCACTAGGATGAGTTCCATTTCTGGGGCTATTGCTTCCACGTTCCATAACATGGAAGGCAGAAGTACCTTGTATGTTAATGGGAACTATTCCAAGGAAAAGTATCATCTTTTGGTCTTTTCATCCACATGTTCCATGATACAATATGCTCTGCGGACCAATAACTGTGAAGATTCAGGTGTTGCTTCTGGATTAATGCCTGGGTATGAGTCTGCCCCGATGACTGATGCAAGAGTGGTTATTGAGCCTATCAAGAAGTGGAATATAAGTCGGAGACATAGTTGCAGAGAAGAAGAAGAAAATATCGACATTTACGGAGAGAATGAAGTTTCAGACATCAATAGAGTATATACGGAGGAAGTAAAGGATAATATCATCAGCCCTAAAATGAAGAATGTATCTGTGAAACTGAATTTCTGTTCTGAGAAAGAGCATCATTTGTTTATTTCAGAAGCTGAACTACAAATGCATGAAGGTAAGGCACCATTGTGGGCAAAGTATGAGATATATTTTCATTCAGTGGCTAAAGAGGCTACTTCGATGATGGATGGGGAAACTGCTTCTGGAGGGGAATTTGAGATTGAAAAAATTCCAACTCGTGTGATAGAAGCTAGGTATAAAGACTTGGTTCCAAATTTTGACTGTATTCAGACTTCAAAATTTCAACATACAAGGACTCCCGCTGTGGATAAGTTTAATGAACAATATTTGCATCAAAATTCCAAGTTGTTTGAAAAGGGAAGGATTTCACCCAGGAGTCTTTCGGGATCTCCTTGTTGTATGACTAATTCTGGTGGAAATATTGCTGAATTTAAAAGTGGGATTGAAGGAAATGAGTGGGGTGATGGTTTTATTCCACCAGAAACAGAGGGTCTTTCTTTGATTAAAGAACTAAAACTACTGGTTGAAGAGGAGGGACTCCAAGCAGTGTTGGTGTTTCCGCTTTTTGGTGTTGCCTTGCTTTGTTGTGTTTTGGACAAAATGTTGCTGCAGATATCACCAAGTTTGAGGCATGTTACCGTGCTTCCGGGAAAGGGGTTGAAGGAATTTATCAAAGTGACGGTTGCATCAAGGAGGCTTTCTTATCGGATGCTCTTCTATTCACTCTTGTTCTTCACATTCCTTCTTAGGTTTGTGTTTGTTTTGACAGCAGTGGATAACATTGATGGAGAAAACAAATGCTCTTCCATAGGTTGCCTGGGAAAAAAACTGAGGCCAAAGATTTTGGGAAGAAGTCTTGAATCAAATGTCCCAGAAGTAATATCCGGAATATTAGATCAACCCCTTGGCAAAGATGAATTAGAGGGAAGGACTGATATCCCACAGACTTTAGAAGAGTTCATGATCCAAATGAAGGAAGGAGGATATGATGCTAAGACATTTGCAATTAAACTAAGAGAAATGGTAACCCTTATGGAACAAAGGACCAGAGAAGCCAAAGTCCAAGAGTATTTATATCGTCATGTTGCATCAAGCAGCATACCAAAACAGCTTCACTGTCTTGGCTTGAAGCTGGCCAATGAGCACACCAACAATGCAGCTGCACGTCTTCAGCTACCCTCTGCAGAACTTGTCCCTGCTCTGGTTGACAACAACTACTTTCACTTTGTTCTGGCCTCAGACAACGTGCTCGCTGCCTCTGTGGTTGCAACATCACTCGTTCGCAACAGTTTGCGACCTCAGAAGGTTGTTCTGCACATAATTACAGATAGAAAGACTTACTATCCCATGCAGGCTTGGTTCTCCTTGCACCCTTTATCACCTGCCATAATTGAGGTCAAGGCATTGCACCACTTTGATTGGTTTACAAAGGGAAAGGTGCCTGTGCTGGAAGCAATGGAAAAAGATCAAACTGTGAGATCACAGTTTAGAGGCGGGTCATCGGCTATTGTTACAAATCCTACCGAGAAGCCAAAAGTAATTGCAGCAAAGTTGCAAACACTTAGTCCTAAGTACAATTCAGTAATGAATCACATTCGGATACATCTTCCAGAGTTGTTCTCAAGTCTTAACAAGGTGGTCTTCCTTGATGATGACATTGTGGTACAAACTGATCTTTCACCTCTGTGGGACATTGATATGAATGGAAAAGTCAATGGAGCAGTAGAAACATGCAGTGGAGAAGATAAGTATGTGATGTCAAAGAGGTTGAAAAGCTATTTGAACTTCTCCCACCCTCTAATATCCCAAAATTTTGATCCCAATGAATGTGCTTGGGCTTATGGAATGAACATTTTCGACCTTGATGCTTGGAGGAAGACCAATATAAGCTCTACATACCATTACTGGGTTGAGCAGAATATAAAATCAGACCTTAGTTTGTGGCAGCTAGGGACATTACCGCCTGGATTAATAGCATTCCATGGTCATGTCCACACTATTGATCCTTTCTGGCACATGCTGGGATTGGGATATCAGGAAAGTACAAGTTTTGCTGACGCTGAGAGTGCTGGTGTCATCCATTTCAATGGCAGGGCAAAGCCATGGCTAGATATAGCTTTTCCCCATCTAAGGCCATTGTGGACCAAGTACATTGACTTTGCAGATTACTTCATAAAGAGCTGTCATATTAAGGCATTGTAA 4452 0.4212 MGTLVTSAKGVMIEFKGEFEELVVNLLYLCVWIAAIFISLIFGMSRNDAQKQGHLLGGVTTGSGGKTNSNGFIPSSFRTLSGYLKSVSSGASTVARSAAASFASSILDKHGDPDRDQASRSSIIGVYGLWLLDLIFVIWAGFDILEGQGGVVLQVLLLGYWSGFQVWNVDDSNNVCDLVSRHDGPVSFMQMVPSPIVSNRLVDKFADKRPLLAVCMDDLLAGRGKIEDELVATCNGSTLNHHDQVNGNYLSTTVHFYSMRSQSYVHALKFRSAVYSVRCSSRVVAVSLATQIHCFSPTTLVREYILLTNPVVMSCPGSGGIGFGPLAVGPRWLAYSGSPSVIATSGRVSPQHLTPSASFPSFSSNGSLFAHYAKQSSKHLASGIVTLGDMGYKKLSSYCSELLPDNNGSIQCVNSSPKGNGIIHGHSTDVENIGMVIVRDIVSKNVIAQFRAHKSPISALCFDPSGTILVTASVQGHNINVFKIMPGYKRVSASDAGPSYVHLYRLQRGLTNAVIQDISFSVDSRWIMISSSRGTSHLFAINPQGGPVNILSCDNSSTEKDGGLKVMTDQAVQWPHSSALEICKQQSLCAAGSPITLSVVSRIRNGSNGWRSSVTGAAAAAAATTRMSSISGAIASTFHNMEGRSTLYVNGNYSKEKYHLLVFSSTCSMIQYALRTNNCEDSGVASGLMPGYESAPMTDARVVIEPIKKWNISRRHSCREEEENIDIYGENEVSDINRVYTEEVKDNIISPKMKNVSVKLNFCSEKEHHLFISEAELQMHEGKAPLWAKYEIYFHSVAKEATSMMDGETASGGEFEIEKIPTRVIEARYKDLVPNFDCIQTSKFQHTRTPAVDKFNEQYLHQNSKLFEKGRISPRSLSGSPCCMTNSGGNIAEFKSGIEGNEWGDGFIPPETEGLSLIKELKLLVEEEGLQAVLVFPLFGVALLCCVLDKMLLQISPSLRHVTVLPGKGLKEFIKVTVASRRLSYRMLFYSLLFFTFLLRFVFVLTAVDNIDGENKCSSIGCLGKKLRPKILGRSLESNVPEVISGILDQPLGKDELEGRTDIPQTLEEFMIQMKEGGYDAKTFAIKLREMVTLMEQRTREAKVQEYLYRHVASSSIPKQLHCLGLKLANEHTNNAAARLQLPSAELVPALVDNNYFHFVLASDNVLAASVVATSLVRNSLRPQKVVLHIITDRKTYYPMQAWFSLHPLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQTVRSQFRGGSSAIVTNPTEKPKVIAAKLQTLSPKYNSVMNHIRIHLPELFSSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCSGEDKYVMSKRLKSYLNFSHPLISQNFDPNECAWAYGMNIFDLDAWRKTNISSTYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHTIDPFWHMLGLGYQESTSFADAESAGVIHFNGRAKPWLDIAFPHLRPLWTKYIDFADYFIKSCHIKAL 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00779 1483 Pfam Breast carcinoma amplified sequence 3 592 834 IPR022175 -
Spst11g00779 1483 Gene3D - 153 541 IPR015943 GO:0005515
Spst11g00779 1483 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1159 1473 IPR029044 -
Spst11g00779 1483 Pfam Glycosyl transferase family 8 1153 1456 IPR002495 GO:0016757
Spst11g00779 1483 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 65 864 IPR045142 GO:0006914
Spst11g00779 1483 SMART WD40_4 443 483 IPR001680 GO:0005515
Spst11g00779 1483 SMART WD40_4 499 540 IPR001680 GO:0005515
Spst11g00779 1483 SUPERFAMILY WD40 repeat-like 155 542 IPR036322 GO:0005515
Spst11g00779 1483 CDD GT8_like_1 1157 1469 - -
Spst11g00779 1483 FunFam Breast carcinoma-amplified sequence 3 362 592 - -
Spst11g00779 1483 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1158 1480 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00779 Spst-Chr11 31524373 31537973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00779 951 1482 Glycosyltransferase AT5G54690 79.775 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00779 K20867 - var:108340445 1371.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00779 11 31524373 31537973 Spst11g00779 11 31524373 31537973 ECH
Spst5g00990 5 9592479 9597309 Spst11g00779 11 31524373 31537973 PCT