Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01768 ATGGGGTCTCTGGTTGCTGAAACAGTCAAGAAGAAAGCAATGTGGTTGTATCCAAAGGTTTTGGGTTATAATCCTTCTGAAAGATGGGGGCACTCTGCTTGCTTCTCTGGGGGGCTTATGTATGTCTTTGGGGGTTGTTGTGGAGGGCTACATTTCGGAGATGTTCTGTGTTTGGACCTTGACAGAATGGACTGGAGCAAGCTTGTCACCACGGGTGAAAAGCCAGGCCCTAGAGATAGCCATAGTGCTGTTCTTGTGGGGCATAGAATGATAGTTTTCGGTGGCACAAATGGGTTAAAGAAGGTGAATGGCATTCATATATTGGACCTTGTTACCAAAGAGTGGATTCGTCCTAAATGTGAAGGGACTCCTCCATCTCCAAGGGAAAGTCACACTGCTACTCTAGTTGGTGATGAAAGACTTGTTATTTTTGGTGGCAGTGGTGAAGGTGACGCAAACTATTTAAATGATTTGCATGTTCTAGACCTTCGAACCATGAGGTGGACTTCTCCTGTGGTCAAAGGTGATTTGCCTGTCCCCAGGGACAGTCACAGCACTCTTGCAATCGGGAACAAGCTTTTTGTGTATGGTGGAGACTGTGGTGATCAGTATCAGGGCGATGTTAATGTGCTGGACATGGACACAATGAATTGGTCAAGGTTGAAAATTCAAGGCTCTTCCCCAGGTGTCAGGGCTGGTCATGCGGCTGTGAACATTGGCACCAAGGTCTACATCATTGGAGGGGTGGGAGATAAACGTTATTACAATGACATATGGGTCTTTGATATCTGCACCTGTTCGTGGGCTCAGCTTGATATTCGTGGTCAACCGCCACAGGGACGATTTTCTCACACAGCTGTTGTTGCAGACATGGATATTGCCATATATGGCGGGTGTGGGGAAGATGAACGTCCTTTGAACGAATTGCTAGTGTTGCAACTTGGAGCAGAGCATCCAAATGGACGTTACAACATATCCATGTGCAAAGTTTTTGGAACTTATTGGAATCAAGAAAAGAGGGCCATACCTCGAGGAGCCGATACCAACTTGACAACTCCATGCCCGGAGAATAATATGGAAGCCATAGGAAAATGGACTAATGAAGTTGTATCTGATAAAGTGCAACCTTGTAACATTGATTCGGGCACTTCACAACAGAAGAGGAGGAGAATTGCCGTTGCAAAGGTGTGGGATGTTGAATCAGAACAGGAAGAACATTCTCTTTCACTGTCCCAGCATTCATCTCCTTCTCAATCTGATCAAGAACAGACCCCAGCTCAAAGAGGAAATGTTTCTATGATGGATTCTCGGAGGTACCATTGGTTCAAACAGATCAATAAAAGTCCAAGCTATTGCCAGCATGACAATGGCTCAAGTAATACCACAGTTTTAAAGAATACCACAGAAAGAAGTGTTCATCTCATGGAACATCAACAACCTAAACAAGAGCAGTATGTTCACGTTGATGATGATAGAAAAGGACCCCGACACACTCAACACCTGATTGGTGCTGAAGTTCGGGGGAAAGTTGATGGAGCCTTTGATTCAGGTTTACTCATGACTGCAGCAGTTAATGGAAGAGTTTTCCGAGGAGTCTTATTTGCACCGGGAGCAGCAGTATTCTCCTCATGTGTGGAGCCAAACTGTTCTTTATCATGTTCATTTCCCTCCACTCAACCATTTACGAACTCAAATCATGTGAGGAATTCCCAGCAAGTAACTAGTTGTTCGCGTGCAGAGCCCTGCCATGGCTTCAGGCAACCTGGGCTAGCACAGCCATCACCAATCATGAGAGGCACTACTTCTACATCTCTAGCCAAAGATCATCAAATGAGGAGTGACCTTCAAGGCTTGGTTTTGACACTTGGAGGGCCTGCAAGTGGTAACCATGCTTGA 1896 0.4557 MGSLVAETVKKKAMWLYPKVLGYNPSERWGHSACFSGGLMYVFGGCCGGLHFGDVLCLDLDRMDWSKLVTTGEKPGPRDSHSAVLVGHRMIVFGGTNGLKKVNGIHILDLVTKEWIRPKCEGTPPSPRESHTATLVGDERLVIFGGSGEGDANYLNDLHVLDLRTMRWTSPVVKGDLPVPRDSHSTLAIGNKLFVYGGDCGDQYQGDVNVLDMDTMNWSRLKIQGSSPGVRAGHAAVNIGTKVYIIGGVGDKRYYNDIWVFDICTCSWAQLDIRGQPPQGRFSHTAVVADMDIAIYGGCGEDERPLNELLVLQLGAEHPNGRYNISMCKVFGTYWNQEKRAIPRGADTNLTTPCPENNMEAIGKWTNEVVSDKVQPCNIDSGTSQQKRRRIAVAKVWDVESEQEEHSLSLSQHSSPSQSDQEQTPAQRGNVSMMDSRRYHWFKQINKSPSYCQHDNGSSNTTVLKNTTERSVHLMEHQQPKQEQYVHVDDDRKGPRHTQHLIGAEVRGKVDGAFDSGLLMTAAVNGRVFRGVLFAPGAAVFSSCVEPNCSLSCSFPSTQPFTNSNHVRNSQQVTSCSRAEPCHGFRQPGLAQPSPIMRGTTSTSLAKDHQMRSDLQGLVLTLGGPASGNHA 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01768 631 MobiDBLite consensus disorder prediction 408 431 - -
Spst10g01768 631 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 14 574 - -
Spst10g01768 631 MobiDBLite consensus disorder prediction 475 495 - -
Spst10g01768 631 MobiDBLite consensus disorder prediction 594 608 - -
Spst10g01768 631 Pfam Galactose oxidase, central domain 231 279 - -
Spst10g01768 631 SUPERFAMILY Kelch motif 20 221 IPR015915 GO:0005515
Spst10g01768 631 Gene3D - 12 119 IPR015915 GO:0005515
Spst10g01768 631 MobiDBLite consensus disorder prediction 584 608 - -
Spst10g01768 631 Gene3D - 120 367 IPR015915 GO:0005515
Spst10g01768 631 MobiDBLite consensus disorder prediction 403 431 - -
Spst10g01768 631 Pfam Galactose oxidase, central domain 87 135 - -
Spst10g01768 631 Pfam Galactose oxidase, central domain 37 85 - -
Spst10g01768 631 Pfam Galactose oxidase, central domain 139 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01768 Spst-Chr10 18083085 18086794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01768 8 413 Acyl Lipid Metabolism Gene Families AT3G05420 30.913 2.32e-39 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01768 K20285 - gmx:100787222 1131.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01768 10 18083085 18086794 Spst10g01768 10 18083085 18086794 ECH
Spst1g02333 1 31952016 31955940 Spst10g01768 10 18083085 18086794 PCT