Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01037 ATGGCCCACGTTACCACCTCAGTCGAGGAGGTTCTTTCGTATGGAAGTTTATGTTCATGTTGGTACCTTAGCTACTCCATTTGTGCAGGTAAATCAAACAATCTCACAGATGAAGACTGTAAGGGAAAAAGTGGACTCGTTGTTAGCTTTGGTGAAATGTTAATAGATCTTGTGCCAACAGTGTCTGGAGTGTCACTAGCTGAAGCACCTGCTTTCAACAAAGCTGCTGGAGGTGCTCCTGCCAATGTGGCTGTTGGCATCTCAAGGCTTGGAGGTTCATCTGCTTTTATAGGCAAGGTTGGAGCAGATGAATTTGGGTATATGTTGGTTAATATTTTAAAGCAGAACAATGTTGACACATCTGGCATAAAGTTTGACCCTAAAGCAAAAACAGCTTTAGCTTTTGTTACACTTAGAGCTGATGGCGAGCGTGAGTTTTTGTTTTTCCGACATCCTAGTGCTGATATGCTTCTTCAAGCGTCAGAGCTTCATACTGATATCATTAAAAAGGCTAAAATATTCCATTTTGGTTCCATCAGCTTGATTCATGAGCCATGCAAGTCTGCTCATCTTGCTGCTATGAAAATTGCTAAAGACTCCGGTTGCATTCTCTCATATGATCCAAATTTAAGATTGGCACTGTGGCCCTCAGCTGAGGCTGCCCGGGATGGCATAAAGAGTGTATGGGATCAAGCTGATGTCATAAAGATAAGTGAGGACGAGATTACATTTTTGACTGGTGGTGATGATCCTTATGATGATAATGTTGTATTAAATAAACTTTTTCACCCTAATCTCAAGCTTTTAATCGTTACTGAAGGGTCAGAAGGTTGTAGATATTACACCAAGGAATTTAGGGGCAGGGTCGAAGGTGTCAAAGTTAAGGCTGTTGACACAACTGGTGCTGGTGATGCATTCGTTAGTGGGATTATCTATAGCTTAGCTTGTGATGAAAGTCTTCTTCAGAATGAGGAACGTCTCCGAAAAGCTCTACATTTTGCGAATGTATGTGGTGCCATTACGGTAACAGAGAGAGGGGCAATTCCTGCACTACCTACAAAAGAAGCTGTCCTGAAATTCGCTGTAACATAA 1092 0.4185 MAHVTTSVEEVLSYGSLCSCWYLSYSICAGKSNNLTDEDCKGKSGLVVSFGEMLIDLVPTVSGVSLAEAPAFNKAAGGAPANVAVGISRLGGSSAFIGKVGADEFGYMLVNILKQNNVDTSGIKFDPKAKTALAFVTLRADGEREFLFFRHPSADMLLQASELHTDIIKKAKIFHFGSISLIHEPCKSAHLAAMKIAKDSGCILSYDPNLRLALWPSAEAARDGIKSVWDQADVIKISEDEITFLTGGDDPYDDNVVLNKLFHPNLKLLIVTEGSEGCRYYTKEFRGRVEGVKVKAVDTTGAGDAFVSGIIYSLACDESLLQNEERLRKALHFANVCGAITVTERGAIPALPTKEAVLKFAVT 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01037 363 Pfam pfkB family carbohydrate kinase 46 353 IPR011611 -
Spst10g01037 363 CDD bac_FRK 46 348 - -
Spst10g01037 363 FunFam Probable fructokinase-2 44 363 - -
Spst10g01037 363 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 77 101 IPR002173 GO:0016301
Spst10g01037 363 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 298 311 IPR002173 GO:0016301
Spst10g01037 363 Gene3D - 44 363 IPR029056 -
Spst10g01037 363 SUPERFAMILY Ribokinase-like 47 360 IPR029056 -
Spst10g01037 363 PANTHER HEXOKINASE FAMILY MEMBER 46 360 - -
Spst10g01037 363 PRINTS Ribokinase signature 72 91 IPR002139 GO:0016301
Spst10g01037 363 PRINTS Ribokinase signature 269 280 IPR002139 GO:0016301
Spst10g01037 363 PRINTS Ribokinase signature 227 242 IPR002139 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01037 Spst-Chr10 11053208 11056396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01037 K00847 - gmx:100818404 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03098 4 70361018 70364234 Spst10g01037 10 11053208 11056396 ECH
Spst10g01037 10 11053208 11056396 Spst10g01037 10 11053208 11056396 ECH
Spst4g03098 4 70361018 70364234 Spst10g01037 10 11053208 11056396 PCT