Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00899 ATGGGTCATGACAGTGGTAAATTCGATACAAACGAAGATGTGTCATGTCTCGTGCCATGTCCTCGGGCCCTCCACTTTATATTTGTCTCGTGGCCTGACCTTTGCCCAACGCCACGGCGATTTCTCCAAACCTTTTATCCTCCACAACTTCTTCACACCCCATTACTCTCCCTCTCTGCGACAATGTCTCAGGTTGTTGCCACTCGATCCATTCACACCTCCCTCACCTCAGGATCTGCACACCACAGGCTGCCAACATCATTGAAGGCTCCAACTTTTGCTTCTAAAGTGTTCCCACTACAAAAGAACAACCCCTCCAAAGTTCGCTACCGAAGTTGCCGCCTCAATGCGAGGAAATCTGCACCCGCTGAAGTTGTCCCCGTGTCACCCGAGGATGATTCAAAGATTGAGGAAGAGTTGCGGCATTTGCGTGGGATTCAGCAACTTGGTGACACTGCAGTTGAAATGTGGTCCAAACCTACGTTTAGGAGGAAGACAAAGATTGTTTGCACCATTGGTCCTTCTACCAACACCAGGGAAATGATCTGGAAGCTGGCCGAGGCTGGAATGAATGTCGCCCGAATGAATATGTCTCATGGAGACCATGCTTCTCATCAGAAAGTTATTGATTTGGTTAAAGAGTATAATGCTCAATCCAAGGACAATGCAATTGCAATTATGCTTGATACTAAGGGTCCTGAAGTTAGGAGTGGGGATTTGCACCAACCAATTTTATTAACACCTGGGCAGGAATTCACTTTTACCATCCATAGAGGTGTTGGAACTGCAGATTGTGTTAGCGTGAACTATGACGATTTTGTCAATGATGTGGAAGTGGGGGACATGATTCTTGTTGATGGTGGTATGATGTCTTTGATGGTGAAGTCTAAGACAGAGGATTCTGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTCAAGTCAAGGAGACATTTGAATGTTAGAGGGAAAAGTGCAACACTGCCTTCCATCACTGATAAGGATTGGGATGATATCAAATTTGGAGTGGATAACAAAGTTGACTTCTATGCTGTTTCTTTTGTGAAGGATGCACAAGTAGTTCATGAACTGAAGAATTATTTAAAAAGCTGTGATGCTGATATACACGTCATTGTAAAAATTGAAAGTGCAGACTCTATACCAAACTTGCATTCAATCATTACGGCGTCTGACGGGGCCATGGTTGCAAGAGGAGATCTTGGTGCAGAGCTCCCTATTGAAGAGGTTCCACTTTTGCAGGAAGAGATAATCAACATATGCCGTAGCATGGGAAAGGCCGTCATTGTGGCAACAAATATGCTGGAAAGCATGATTGTTCACCCAACACCAACCAGAGCTGAGGTATCTGATATTGCAATTGCTGTTCGAGAAGGTTCTGATGCAATAATGCTTTCTGGGGAAACTGCTCACGGAAAGTTCCCACTAAAAGCCGTGAAAGTAATGCACACTGTAGCATTACGGACAGAAGCCACTATACCAGTTGGTCAAATGCCACCTAATATTGGTAAAGTATTCAAGAATCATATGAGTGAGATGTTTGCTTACCACGCAACCATGATGTCTAATACCCTTGGAACCTCAACTGTTGTCTTCACTAGATCAGGCTTCATGGCTATCCTTTTGAGCCACTATAGACCTGCAGGCACCATATTTGCTTTCACAGACGAAAAGAGGACACAACAGAGGTTGGCTTTGTATCAAGGTGTGTGTCCTATTTACATGAAATTCTCAGAAGATCCTGAAGAAACTTTCACAAGAGGCTTGGATCTGCTGCAGAAGCAAGGGATGGTGAAAGCAGGAGAAGAAGTAGCACTAGTACAAAGTGGCAAGCAACCCATTTGGAGGTTCCAATCCACTCACAATATCCAGGTCCGAAGGGTGTCAATAAAATAA 1911 0.4437 MGHDSGKFDTNEDVSCLVPCPRALHFIFVSWPDLCPTPRRFLQTFYPPQLLHTPLLSLSATMSQVVATRSIHTSLTSGSAHHRLPTSLKAPTFASKVFPLQKNNPSKVRYRSCRLNARKSAPAEVVPVSPEDDSKIEEELRHLRGIQQLGDTAVEMWSKPTFRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARMNMSHGDHASHQKVIDLVKEYNAQSKDNAIAIMLDTKGPEVRSGDLHQPILLTPGQEFTFTIHRGVGTADCVSVNYDDFVNDVEVGDMILVDGGMMSLMVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITDKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCDADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDAIMLSGETAHGKFPLKAVKVMHTVALRTEATIPVGQMPPNIGKVFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMAILLSHYRPAGTIFAFTDEKRTQQRLALYQGVCPIYMKFSEDPEETFTRGLDLLQKQGMVKAGEEVALVQSGKQPIWRFQSTHNIQVRRVSIK 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00899 636 Gene3D - 234 327 IPR015806 GO:0004743|GO:0006096
Spst10g00899 636 Pfam Pyruvate kinase, barrel domain 164 499 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g00899 636 Gene3D - 166 491 IPR040442 -
Spst10g00899 636 NCBIfam pyruvate kinase 164 632 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g00899 636 FunFam Pyruvate kinase 495 614 - -
Spst10g00899 636 PANTHER PYRUVATE KINASE 140 611 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g00899 636 ProSitePatterns Pyruvate kinase active site signature. 374 386 IPR018209 GO:0004743|GO:0006096
Spst10g00899 636 FunFam Pyruvate kinase 329 494 - -
Spst10g00899 636 SUPERFAMILY PK beta-barrel domain-like 233 324 IPR011037 -
Spst10g00899 636 PRINTS Pyruvate kinase family signature 222 238 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g00899 636 PRINTS Pyruvate kinase family signature 403 427 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g00899 636 PRINTS Pyruvate kinase family signature 346 360 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g00899 636 PRINTS Pyruvate kinase family signature 376 402 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g00899 636 PRINTS Pyruvate kinase family signature 453 471 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g00899 636 PRINTS Pyruvate kinase family signature 472 488 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g00899 636 PRINTS Pyruvate kinase family signature 428 452 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g00899 636 Gene3D - 506 634 IPR036918 -
Spst10g00899 636 Pfam Pyruvate kinase, alpha/beta domain 521 614 IPR015795 -
Spst10g00899 636 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 154 498 IPR015813 GO:0003824
Spst10g00899 636 FunFam Pyruvate kinase 234 327 - -
Spst10g00899 636 SUPERFAMILY PK C-terminal domain-like 482 633 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00899 Spst-Chr10 9809001 9816050 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00899 K00873 - gmx:100818193 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00899 10 9809001 9816050 Spst10g00899 10 9809001 9816050 ECH
Spst4g03302 4 72875552 72882814 Spst10g00899 10 9809001 9816050 PCT