Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00829 ATGAAACAGAAAGGAGTGGTGAGTGTGTCTCAATCTCCATCAGAAGCGTTGGATCATGCCACTGAACCCGGGACCCACCAGATGATGACGTGTCCGTACCAAGAAGGACTCTTCATGGCTACAAAGCGCGTGTACCAAGTTTGGAAAGGAAGTAATGTAAAGTTCACTTCTTTTCCTCTTCTTCGTTGCAATTTTAGCTTCACATGCCTTCTGGGTATGTTCTGGGTTTGTGGCTCTTTGGTTTGCTTGATGCTGAAGGTTTTGAATTTCTTCTGGGGTAGTTTTGGTTGCTGGAATGTGGAAATTATTGAACGAGTAGGATATGATGCAGGTTGGGTTATTGATTGGGTTAAATTGGAATGTGGGATGGACCACTTGAGCAGGACAGACAGATGTCTACTACTGCATGAGGATTTTTCCATGGACAAGGATAGGATTATGCCTGTGACGGTTTTGCCATATTGGGTTCTTTCCGCTTTAGATAGGATAGGAGGATTCATTATTCTCCTTTCTAATGTACGCTATTGTTCTCTTGAAATGATAAATTCTTATGTGGAGGGAGCAAGGCATCTTCGGCATGAATTTTCTTCATACAATTCTGGATATGCTATTTTAGCAGTGGCTATTCTCTTTACTATTCATGTTCTGGTGGTTCTCTTTCTTACTTCCTCTGGTGATCCGGGCATCGTTCCAAGGAATCCTCATCCACCAGAGGAAGAGTTTCGTTACGATTCTTCAATTTCTGCTGATATTGGGGGAACTGGACGGCAAACACCAAGCCTCCAGTTCCCTCGAACAAAAGAAGTTATAGTCAATGGCCTTGCTGTGAGGGTGAAATATTGTGAGACGTGTATGCTGTATCGTCCTCCTCGTTGTTCACACTGCTCCATTTGCAACAACTGTGTTGAGCGTTTTGATCACCATTGCCCCTGGGTGGGCCAGTGCATTGGTCTGAGGAACTATCGTTACTTCTTTATGTTTGTTTCTTCAGCAACCATTCTGTGCATCTATGTGTTTTCCCTCTCAGCTCTTTATATCAAGGTTCTGATGGATAATTATGACGGCACAGTTTGGAAGGCAATGAAAGAATCTCCTGCATCTGTGATACTAATGGTTTATTGCTTCATTTCACTGTGGTTTGTTGGTGGACTTACTGGTTTTCATTTATACCTTATAGGCACAAATCAGACTACCTATGAAAACTTCCGGTACAGAGCTGACGGCAGGATCAATGTTTTTAACCGGGGTTGTTTGACTAATTTTGTGGAAGTGTTTTGCACAAAAGTAAAGCCCTCAAGGAACAATTTCAGGGCATTTACTAGAGAGGAGGTGCCAAGGCCACTGGCTCCGATCACTAGGCGGGCTCGTGACCCAGATGATGACTTGGATGGAGATCGCCGTCCTAAGGTTGAAGATGATCTTGACATTGGGGAAGACCTATTGAAAATATCACAGCGCAGGAACATTGAAGAACTTGATGAGGACATTCGTGACAGAGGGAGCAATGGACCACCCCACCATACATCTGAACCTGACTCAATTTTGTCCTCCGATCATCGAGCTCCCACGATTCGATCGGATGCTAGGCACTCGAGTTGGGATAGGAGTGGAAACTGGGAAATTGCCCAAGAGGTTCTTGCCAATTCAAATGTCACAGAAAGCAGAAACTATTTGACTTCAAAGGAAATGCGCCAATGA 1698 0.4405 MKQKGVVSVSQSPSEALDHATEPGTHQMMTCPYQEGLFMATKRVYQVWKGSNVKFTSFPLLRCNFSFTCLLGMFWVCGSLVCLMLKVLNFFWGSFGCWNVEIIERVGYDAGWVIDWVKLECGMDHLSRTDRCLLLHEDFSMDKDRIMPVTVLPYWVLSALDRIGGFIILLSNVRYCSLEMINSYVEGARHLRHEFSSYNSGYAILAVAILFTIHVLVVLFLTSSGDPGIVPRNPHPPEEEFRYDSSISADIGGTGRQTPSLQFPRTKEVIVNGLAVRVKYCETCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSATILCIYVFSLSALYIKVLMDNYDGTVWKAMKESPASVILMVYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADGRINVFNRGCLTNFVEVFCTKVKPSRNNFRAFTREEVPRPLAPITRRARDPDDDLDGDRRPKVEDDLDIGEDLLKISQRRNIEELDEDIRDRGSNGPPHHTSEPDSILSSDHRAPTIRSDARHSSWDRSGNWEIAQEVLANSNVTESRNYLTSKEMRQ 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00829 565 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 191 442 - -
Spst10g00829 565 MobiDBLite consensus disorder prediction 506 520 - -
Spst10g00829 565 MobiDBLite consensus disorder prediction 494 536 - -
Spst10g00829 565 MobiDBLite consensus disorder prediction 1 22 - -
Spst10g00829 565 Pfam DHHC palmitoyltransferase 279 403 IPR001594 GO:0016409
Spst10g00829 565 MobiDBLite consensus disorder prediction 1 18 - -
Spst10g00829 565 ProSiteProfiles DHHC domain profile. 279 329 - -
Spst10g00829 565 MobiDBLite consensus disorder prediction 449 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00829 Spst-Chr10 8732729 8737981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00829 203 425 Lipid Metabolism Gene Families AT4G22750 29.130 3.01e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00829 K16675 - gmx:100805189 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03398 4 74231343 74251529 Spst10g00829 10 8732729 8737981 PCT