Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07693 ATGAAGCTTCGGAGATCCTCCTTGGGTTTCTTTCTAGGGTTTCTGTTGCTCTCCTTGACGCCGTTGTCAATGGCGAGATTCGTGGTGGAGAAGAACAGCTTGACGGTGACGTCGCCGGATAAGATTAAGGGCACCCACGACAGTGCGATTGGCAACTTTGGGATACCCCAGTACGGTGGTAGCATGGCTGGAAACGTCGTGTACCCAAAGGATAACCAGAAGGGTTGCAAGGAGTTCGATGAGTTTGGGATTTCCTTCAAATCCAAGCCTGGAGCTCTTCCTACTATCGTTTTGCTCGATCGTGGAAATTGCTTCTTTGCTTTGAAGGTCTGGAATGCCCAGAAGGCTGGAGCTTCTGCTGTTCTTGTTGCAGATGATATTGAGGAGAAATTAATAACCATGGACACACCTGAAGAGGATGGATCATCTGCAAAATACATTGAGAACATAACAATACCATCAGCTCTCATCGAGAAAAGTTTCGGAGAAAAATTGAAGAATGCCATAAGTGGTGGGGAAATGGTCAATGTAAATCTTGATTGGAGAGAGGCTGTCCCCCACCCAGATGATCGTGTGGAGTATGAGTTGTGGACCAACAGCAATGATGAGTGTGGAGTTAAATGTGATATGTTGATGGAATTTGTGAAGGATTTTAAGGGTGCAGCACAGATATTAGAGAAAGGTGGGTATACTCAGTTTACACCCCATTATATAACTTGGTACTGTCCTCAGGCATTCACATTAAGCAAACAGTGTAAGTCCCAGTGCATAAATCATGGAAGATATTGCGCCCCAGATCCTGAGCAGGACTTTAGCACTGGTTATGATGGAAAAGATGTGGTTATTGAAAATTTAAGGCAGCTATGTGTTTTCAAGGTGGCAAATGAAACCAAAAAGCCTTGGGTGTGGTGGGACTATGTTACTGATTTTCAAATTAGATGCCCAATGAAGGAGAAAAAATACAACAAGAAATGTGCAGATGCTGTCATTGAATCACTAGGTCTTGATATTAAAAAGATTGAAAGGTGCATGGGAGATCCAGATGCTGACTCTGAAAACCCTGTTTTGAAAGAAGAGCAAGATGCCCAAGTTGGGAAGGGATCGCGAGGTGATGTGACCATATTGCCTACTCTAGTTGTCAACAATCGGCAGTATCGAGGAAAATTGGAGAAAGGTGCTGTTATGAAAGCTATTTGTTCTGGTTTTGAAGAAACTACCGAACCAGCTGTTTGTTTGAGCAGTGGTAAGTGTTTACTTTCTTTTGATGTGGAGACAAATGAGTGCTTAGAGAATAATGGTGGTTGTTGGCGGGATAAAACAGCTAACATTACTGCATGCAAGGATACATTCCGAGGGCGTGTATGTGAATGCCCTTTGGTGGATGGTGTGCAGTTCAAAGGAGATGGTTATACAACCTGTGAAGCTAGTGGACCTGGGCGGTGCAAGATAAACAATGGAGGTTGCTGGCATGAAGCCCGGAATGGACATGCATTTTCTGCTTGTTCGGATAATGGAGAGGTTAAATGCCAGTGTCCTGCAGGGTTTAAAGGTGATGGTGTCAAAAATTGTGAAGACATTGATGAATGCAAAGAGAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACTTGGGGCAGCTATGACTGCAGTTGTAGTGGAGATCTTCTGTATATCAGGGACCATGATACCTGCATAAGTAAAACTGCTAGTCAGGAGGGAAGATCTGCTTGGGCTGCTTTTTGGGTCATTTTAGTTGGCTTAGTTGTGGCTGCTGCTGGGGCATACCTTGTGTACAAATACAGAATAAGGTCATATATGGATTCAGAAATCAGAGCCATCATGGCACAGTATATGCCCTTGGACAGCCAAGCAGAAGTTGTAAATCATGTTAACGATGAAAGAGCATGA 1914 0.4383 MKLRRSSLGFFLGFLLLSLTPLSMARFVVEKNSLTVTSPDKIKGTHDSAIGNFGIPQYGGSMAGNVVYPKDNQKGCKEFDEFGISFKSKPGALPTIVLLDRGNCFFALKVWNAQKAGASAVLVADDIEEKLITMDTPEEDGSSAKYIENITIPSALIEKSFGEKLKNAISGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKKCADAVIESLGLDIKKIERCMGDPDADSENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVMKAICSGFEETTEPAVCLSSGKCLLSFDVETNECLENNGGCWRDKTANITACKDTFRGRVCECPLVDGVQFKGDGYTTCEASGPGRCKINNGGCWHEARNGHAFSACSDNGEVKCQCPAGFKGDGVKNCEDIDECKEKKACQCPECSCKNTWGSYDCSCSGDLLYIRDHDTCISKTASQEGRSAWAAFWVILVGLVVAAAGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQAEVVNHVNDERA. 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07693 637 MobiDBLite consensus disorder prediction 348 365 - -
Seca8g07693 637 ProSitePatterns EGF-like domain signature 2. 509 523 IPR000742 -
Seca8g07693 637 Pfam Complement Clr-like EGF-like 508 528 IPR026823 -
Seca8g07693 637 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 15 626 - -
Seca8g07693 637 CDD EGF_CA 525 553 - -
Seca8g07693 637 Gene3D - 24 188 - -
Seca8g07693 637 ProSitePatterns Calcium-binding EGF-like domain signature. 525 551 IPR018097 GO:0005509
Seca8g07693 637 FunFam vacuolar-sorting receptor 1 417 474 - -
Seca8g07693 637 SUPERFAMILY PA domain 32 172 IPR046450 -
Seca8g07693 637 Pfam PA domain 63 165 IPR003137 -
Seca8g07693 637 CDD PA_VSR 52 179 - -
Seca8g07693 637 Gene3D Laminin 479 529 - -
Seca8g07693 637 Gene3D Laminin 419 474 - -
Seca8g07693 637 SMART egfca_6 525 567 IPR001881 GO:0005509
Seca8g07693 637 MobiDBLite consensus disorder prediction 348 368 - -
Seca8g07693 637 FunFam Vacuolar-sorting receptor 1 24 188 - -
Seca8g07693 637 Gene3D Laminin 530 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07693 Seca-Chr8 174234503 174240185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07693 25 637 Miscellaneous Gene Families AT2G14740 84.829 0.0 1104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07693 - - gmx:100803958 1221.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07693 8 174234503 174240185 Seca8g07693 8 174234503 174240185 ECH
Seca10g00052 10 461852 465842 Seca8g07693 8 174234503 174240185 PCT