Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07330 ATGCAACTCACTTCTCTCTTTCTCTCTCTTGTAACTCAGACCCTTCTCTGTGACTCCTTCCTTCTTTCCTTCCATTCATCAATGGCGCCAGGGGAGCATGAATCCTTCGTCGATAAGATAGAGGAGAAGTTCCACGATCACCACACCGATTCCGATTCATATTCCGATTCCGACGACGACCACAAGAAAAAGAGGCCGCCGGCGCAGGCCACCAAGTCCAATGTTTACCGTCTCTTCGGCCGCGATCAGCCCGTCCACAAGGTCTTGGGCGGTGGAAAACCTGCTGATATTTTCCTATGGAGGAACAAGAGAAGCACGGGAATTGTACTCGGTGCTGGCACTGCCTTATGGGTTTTCTTTGAGTTGCTGGAATACCACTTTATAACTCTTGTTTGCCATTTATTGATTCTAGCTCTGGCGGCCCTTTTCTTGTGGTCCAATGCATCTGTCTTTATTCACAAGTCTCCATTGCAAATCCCGCATATTGCAATTCCTGAGGAATGCGTTCTTGAGGTTGTTTCTGCTCTGAGAGTTGAAATTAACCAAGCCTTTGTTGTTTTGCGGGAAATTGGAACTGGGAGAGATTTAAAAAAGTTCCTTAGCGTTATTGCTGGATTGTGGGTTATCTCGGTTGTTGGGAATTGGTTCAACTTCTTGACCCTGTTTTACCTATTCTTTGTGTCACTGTTCACATTGCCACTGCTGTATGAGAAACATGAAGATCAGGTTGATGCACTAGCTGAGAAGGCAATGATTGAGATCAAGAAACAGTATGCAGTGCTTGATGCTAAGGTTTTGAGCCAGCTACCGATAGCAGGGTTGAAAAAAGATTAG 834 0.4556 MQLTSLFLSLVTQTLLCDSFLLSFHSSMAPGEHESFVDKIEEKFHDHHTDSDSYSDSDDDHKKKRPPAQATKSNVYRLFGRDQPVHKVLGGGKPADIFLWRNKRSTGIVLGAGTALWVFFELLEYHFITLVCHLLILALAALFLWSNASVFIHKSPLQIPHIAIPEECVLEVVSALRVEINQAFVVLREIGTGRDLKKFLSVIAGLWVISVVGNWFNFLTLFYLFFVSLFTLPLLYEKHEDQVDALAEKAMIEIKKQYAVLDAKVLSQLPIAGLKKD. 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07330 277 ProSiteProfiles Reticulon domain profile. 94 277 IPR003388 -
Seca8g07330 277 MobiDBLite consensus disorder prediction 47 70 - -
Seca8g07330 277 PANTHER RETICULON 69 270 - -
Seca8g07330 277 Pfam Reticulon 95 250 IPR003388 -
Seca8g07330 277 MobiDBLite consensus disorder prediction 47 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07330 Seca-Chr8 170020991 170023546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07330 - K20721 gmx:100790190 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06547 12 157575697 157582745 Seca8g07330 8 170020991 170023546 ECH
Seca8g07330 8 170020991 170023546 Seca8g07330 8 170020991 170023546 ECH