Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06547 ATGGCGGAGCATCACGAGCACGAGGAAGCGAAGGGTGAATCGCTGTTGGAAAAGATTTCGGGGAAGATCCACGACCATGACTCGTCTTCTTCATCGGATTCAGACAATGAGAAAAACAGCTCCTCTCCTTCCTTGAAGGACAAGGTTTTCAGGCTTTTCGGCAGGGAAAGGCCCATTCACAATGTCTTTGGTGGAGGAAAACCTGCTGATGTTTTTCTATGGAGAAATAAGAAGATATCAGCGACAGTGCTTGGAGTTGCGACAGCTATATGGTTTCTGTTTGAATTGCTTGAATACCACCTCCTCACTTTGATTTGCCACCTCCTGATACTTTCACTGGCAGTATTGTTCTTGTGGTCTAATGCATCCACTTTTATCAACAAGAGTCCACCAAAGATCCCACAAGTGCACATTCCTGAGGAACCTGTATTACAGTTTGCCTCTGCTCTTAGACAGGAGATCAATCGGGCTTTTGCTGTATTGAGAGATATTGCATCTGGAAGGGATCTCAAGAAGTTTCTCTCAGTGATTGCTGGATTATGGGTTTTCTCTATTGTTGGGAGTTGGGCCAACTTCTTGACATTGTTCTACATAGGCTTTTGTTTTGCTTCACACTGTACCTGTGCTTTATGA 633 0.4439 MAEHHEHEEAKGESLLEKISGKIHDHDSSSSSDSDNEKNSSSPSLKDKVFRLFGRERPIHNVFGGGKPADVFLWRNKKISATVLGVATAIWFLFELLEYHLLTLICHLLILSLAVLFLWSNASTFINKSPPKIPQVHIPEEPVLQFASALRQEINRAFAVLRDIASGRDLKKFLSVIAGLWVFSIVGSWANFLTLFYIGFCFASHCTCAL. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06547 210 ProSiteProfiles Reticulon domain profile. 68 200 IPR003388 -
Seca12g06547 210 Pfam Reticulon 69 203 IPR003388 -
Seca12g06547 210 MobiDBLite consensus disorder prediction 22 44 - -
Seca12g06547 210 PANTHER RETICULON 41 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06547 Seca-Chr12 157575697 157582745 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06547 - - gmx:100811024 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06547 12 157575697 157582745 Seca12g06547 12 157575697 157582745 ECH
Seca12g06547 12 157575697 157582745 Seca8g07330 8 170020991 170023546 ECH