Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07073 ATGGCAACACATGACATGGATCCTGATGTTGTTCGCTGGGGTCTTCATCTCCTAGATGTTTGCACACTTTCTCATAGAGGTTCGCCTAGTATCATAACTCAATATGATCCAGATTTAAGTCAAATTGAATATGTTAGGGAAGGCTTCTGTCAGCATTCATATGTAGAGAATGATGAGGCTGTTGCACGTGCTTATCAAGAAGAATTGTCACAACTTGATTCGATGGAAGCATCTGGGATGTCACATTTTGAGAATGAGCAAGTACGAGCATCCGTTTATGGGCAAGATTGGCTTACACCTTCAAATGGAAACTATAACTTTGGCAGTGACTCTTGCCAGAACTCTGTTGATGAGTCATACAATATGAAAGAAGCAGATAATTGTGGTCTGAGTGAAAGGGAAAATGATATGCATGAAATTGAAGTTTTTGGTTCATCATCTGGGTCAGGAGAAATAGCTGTTACTAGTGATGACTTGTGGCATTCATTGGAAATATCAGATGAGTCTTCTCTTGATGGTGAAGTAGGCAAAATATTAAACCAGATGGTTCCAATTCCTTCACTCACTTATTTCTCTTGTTTGTGTTTTCAGCATATCCCTAAAACCAATGAAAAAATACCATCTGATGACGAAGAAATATCAGATCATCAAAGGCTGCTAGACAGACTGCAGTTATATGATCTAATTGAGTCTAAGGTTGAAGGAGATGGTAACTGCCAGTTTCGTGCTTTGTCAGATCAACTCTATCGCTCTCCAAACCACCACAAAATTGTGCGGGAGCAAGTTATTCAACAGCTCAAGTCTTACCCAGACCTATATGCGGGTTATGTTCCTATGGCTTATAGTGATTATTTGAAGAAGATGAGCAAGAGTGGTGAATGGGGTGATCATGTCACATTGCAGGCTGCTGCAGATTGGTATGGTGTCAAAATTTTTGTCATTACGTCTTTTAAGGACACATGTTACATAGAGATTCTTCCACAGATGCAGAAGTCTGGAAGAGTGATATTTCTGAGCTTCTGGGCAGAGGTGCATTACAACCCAATTTATCCAGAAGGAGGTAACGTATTTATACAAACACTGTATAAACTCTATAAATGA 1101 0.3951 MATHDMDPDVVRWGLHLLDVCTLSHRGSPSIITQYDPDLSQIEYVREGFCQHSYVENDEAVARAYQEELSQLDSMEASGMSHFENEQVRASVYGQDWLTPSNGNYNFGSDSCQNSVDESYNMKEADNCGLSERENDMHEIEVFGSSSGSGEIAVTSDDLWHSLEISDESSLDGEVGKILNQMVPIPSLTYFSCLCFQHIPKTNEKIPSDDEEISDHQRLLDRLQLYDLIESKVEGDGNCQFRALSDQLYRSPNHHKIVREQVIQQLKSYPDLYAGYVPMAYSDYLKKMSKSGEWGDHVTLQAAADWYGVKIFVITSFKDTCYIEILPQMQKSGRVIFLSFWAEVHYNPIYPEGGNVFIQTLYKLYK. 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07073 366 PANTHER OTU DOMAIN CONTAINING PROTEIN 56 353 - -
Seca8g07073 366 FunFam OTU domain-containing protein 210 356 - -
Seca8g07073 366 Gene3D - 209 358 - -
Seca8g07073 366 ProSiteProfiles OTU domain profile. 228 352 IPR003323 -
Seca8g07073 366 CDD OTU_plant_OTU9-like 219 350 - -
Seca8g07073 366 Pfam OTU-like cysteine protease 235 320 IPR003323 -
Seca8g07073 366 SUPERFAMILY Cysteine proteinases 215 351 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07073 Seca-Chr8 166659061 166669100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07073 - - gmx:100820379 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05356 8 144351026 144357067 Seca8g07073 8 166659061 166669100 ECH
Seca8g07073 8 166659061 166669100 Seca8g07073 8 166659061 166669100 ECH