Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05356 ATGGTTTTATATGAGGATTCAGATGTTGTTCAGTGGGGTATTGATCTTTTTGATGGTGACCCTGGCTATAATCCTGGATACTATGGTGACATAATTCAGCATGATACTGGTGATATTTATAATGGACACTACTTCCATAGCCATTATGACACTGAATATAACCAAGTAGAGAATGATGAGATCATTGCACAGACTCTTCAAGAAGAGTTTTCACGGCTAGCGATTGCTGAGTGTTCAAGGTATTCACATGCAGATGAAGAACAGTTCCATGCTTCTGAGCCTACATATGATTGGCATAACACATCAATGACGAATTATTATTCAGGAGGTCATGATTATACCCATGAAGGAGTTGATGACATAGAACCTTCTAGTTCATGTTGTAGTCCTTGTGAAGTGGGGGAATGCTCCTTGGAGCTTATTGACAATTATCCACTTGATGATGAAATAGGGAGGAGATTGAGTCAGATGATTCCAATTCCTCATGTTCCAAAAATTAATGGAGAAATTCCTTCAATTGATGAAGCAACTTCTGATCATCAAAGGCTTCTGGATAGATTGCAGTTATATGACTTTGTGGAGCACCAGGTACAAGGTGATGGTAATTGTCAGTTCCGTGCATTATCTGATCAGTTGTATAACACACCTGATCACCACAAGTTTGTGAGACGACAAGTTGTGAGCCAGCTGAAGTCTCATCCAGAGATTTATGAGGGATATGTTCCCATGGAATATGACGAATATTTGGAGAAAATGTCTAAGAGTGGTGAATGGGGTGATCATGTCACTCTTCAAGCAGCTGCAGATTCGTATGGTGTGAGAATATTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATTCTTCCTAATTTTGAGAAGCCAAAAGGAGGTAAGATTTTCTTAGTAGTGAGGCCTGACATATCCCTGGACCCTAGCTAA 945 0.3989 MVLYEDSDVVQWGIDLFDGDPGYNPGYYGDIIQHDTGDIYNGHYFHSHYDTEYNQVENDEIIAQTLQEEFSRLAIAECSRYSHADEEQFHASEPTYDWHNTSMTNYYSGGHDYTHEGVDDIEPSSSCCSPCEVGECSLELIDNYPLDDEIGRRLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHQVQGDGNCQFRALSDQLYNTPDHHKFVRRQVVSQLKSHPEIYEGYVPMEYDEYLEKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPNFEKPKGGKIFLVVRPDISLDPS. 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05356 314 ProSiteProfiles OTU domain profile. 192 308 IPR003323 -
Seca8g05356 314 Gene3D - 173 305 - -
Seca8g05356 314 FunFam OTU domain-containing protein 174 311 - -
Seca8g05356 314 PANTHER OTU DOMAIN CONTAINING PROTEIN 54 293 - -
Seca8g05356 314 CDD OTU_plant_OTU9-like 183 291 - -
Seca8g05356 314 SUPERFAMILY Cysteine proteinases 178 289 IPR038765 -
Seca8g05356 314 Pfam OTU-like cysteine protease 198 284 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05356 Seca-Chr8 144351026 144357067 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05356 - - gmx:100811851 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05356 8 144351026 144357067 Seca8g07073 8 166659061 166669100 ECH
Seca8g05356 8 144351026 144357067 Seca8g05356 8 144351026 144357067 ECH