Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06676 ATGGGAAACCAAATGTCACTTCGTCCCTCAGATGCCTCCACAGGCAAAATTGTTTTCTGGGATGGCTCTGTTCAACAATTTGAGCAACCAATAACAGTGGCAGAGCTTATGTTGGAGCATCCACAACAAGTAGTGGTTGAGTTCCATTCAGCTGTGAATCAAAAAAGGCCAACACCATTGCCTGCAGACAAGAAGCTAGACATGAACAAGATATATTTGATGCTTCCAATTAAGCGAGGGAAGCCTGTTAGTTTAAGCAATGAAGAGAGTCGTCGAATTGTGTTGATGGTTAACAAGTATGTTGCGTGTTCTTCAAGGTTTCTTCTTCCTGGTCTTACGTGTCTATGCCAGACAAGTGCAATTGTGGAGCCTGGAAGAAAGGAGGAAATTGAGAAGAAGGAAGAGAGGTATGAGTTTCCTGAGATTTTGGAAGAGGTGTTAGAAGGGAGGCCTGAGTATTTGAATAGGCAATTGTCAGGGAAAGGGTGGAAGCCTAGTTTGGATACCATTAAGGAGAAGAATATTGAAAGAAAACTCTCTCACTGGTTGTTCCTCAAGAGTTTTTAG 567 0.425 MGNQMSLRPSDASTGKIVFWDGSVQQFEQPITVAELMLEHPQQVVVEFHSAVNQKRPTPLPADKKLDMNKIYLMLPIKRGKPVSLSNEESRRIVLMVNKYVACSSRFLLPGLTCLCQTSAIVEPGRKEEIEKKEERYEFPEILEEVLEGRPEYLNRQLSGKGWKPSLDTIKEKNIERKLSHWLFLKSF. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06676 188 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 12 172 - -
Seca8g06676 188 Pfam PADRE domain 1 172 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06676 Seca-Chr8 161364766 161365332 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06676 - - gmx:100784884 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06676 8 161364766 161365332 Seca8g06676 8 161364766 161365332 ECH
Seca8g06676 8 161364766 161365332 Seca2g05105 2 137529482 137530099 PCT