Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05105 ATGGGAAACCATATATCATTTCATCATGGCTCAGATTCAACAGGGAAAATTGTTTACTGGGATGGTTCTGTTCAAGAGTTTGACCAAAACCAACCACTAACTGTGGCAGAGCTTATGTTGGAGCATCCACAACAAGTAGTGGTTGAGTTTGATTCAGCTGTGAATCAGAAAAAGCCAACTCCATTGCCAGCTGATAAGAAGCTTGAAATGAAGAAAACATATGTAATGGTTCCATTGAAGCGAGGGAAGCCTGTTGGATTGAGTAGTGAAGATTGTCGCAGGTTTCTCTTGATTGTTAATTCTTCTCTGCATTCCAAGTTTCTCATGTCCTCTGTTTCGGGTTTTGTTCCTTGGCTTGTTCGGATATTCAAGACAGATCAGAACAATAGCAATGCAATTGGTGAGGCTCAGATAAAGGAAGAGATGGAGGAAGAAAGGTACGATTTTTGTGAGTTTTTGCCAGAAATGATGGAAGAGAGACCAGAATATCTGAGTAGGCAATTGTCAGGGAAAGGGTGGAAGCCTAGCTTGGACACCATTAAGGAGAAGAAAGTTAAGAGAAAACTTTTTTACTGGTTGTTCCTCAAGAGTTTTACTGGTAGAAAGATTTCAATGTGA 618 0.4029 MGNHISFHHGSDSTGKIVYWDGSVQEFDQNQPLTVAELMLEHPQQVVVEFDSAVNQKKPTPLPADKKLEMKKTYVMVPLKRGKPVGLSSEDCRRFLLIVNSSLHSKFLMSSVSGFVPWLVRIFKTDQNNSNAIGEAQIKEEMEEERYDFCEFLPEMMEERPEYLSRQLSGKGWKPSLDTIKEKKVKRKLFYWLFLKSFTGRKISM. 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05105 205 Pfam PADRE domain 1 182 IPR025322 -
Seca2g05105 205 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 12 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05105 Seca-Chr2 137529482 137530099 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05105 - - var:108328709 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05105 2 137529482 137530099 Seca2g05105 2 137529482 137530099 ECH
Seca8g06676 8 161364766 161365332 Seca2g05105 2 137529482 137530099 PCT