Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06520 ATGGGGTCTGAAGGTCCTCCAGCAGCTGTAACAACAGTTCATGTAACAGGTTTCAAGAAATTCCATGGAGTTTCAGAGAATCCAACGGAGACAATTGTTAACAATTTGATGGAATATATGAAGAAAAAGGGCCTACCAAAAGGGTTAGTTATTGGGAGCTGCAACATTCTTGAGACTGCTGGTCAAGGAGCAATTGTTCCCCTATACCAGACATTGCAATCTGCTATTAGTGGCAAGGACCCTGAATCTGCAAGTTCCGACAGAATTATCTGGCTGCATTTTGGGGTAAACAGTGGTGCAACAAGGTTTGCTATAGAGCGTCAAGGTGTCAATGAGGCTACCTTTCGTTGCCCTGATGAAATGGGATGGAAGCCTCAGAAAGTCCCCATTGTTCCTTCAGATGGTTCGATTACACGAACACGGGAGACTTCCCTTCCTGTGGAGGAGATCACCAAGGCCTTGGCAAAGAAGGGTTATGATGTAATGACATCTGATGATGCAGGCAGGTTTGTGTGCAATTACGTTTACTATCATTCTCTTCGTTTTGCAGAGCAGAATGGGACCAAGTCCCTTTTTGTGCACGTGCCACTCTTCTTCACAATTGATGAAGAGACCCAAATGCAATTTGCTGCTTCCTTGTTAGAGGTACTTGCTTCTATATGTTAG 666 0.4444 MGSEGPPAAVTTVHVTGFKKFHGVSENPTETIVNNLMEYMKKKGLPKGLVIGSCNILETAGQGAIVPLYQTLQSAISGKDPESASSDRIIWLHFGVNSGATRFAIERQGVNEATFRCPDEMGWKPQKVPIVPSDGSITRTRETSLPVEEITKALAKKGYDVMTSDDAGRFVCNYVYYHSLRFAEQNGTKSLFVHVPLFFTIDEETQMQFAASLLEVLASIC. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06520 221 PIRSF Pyrrolidone-crbxlat_pptds 10 221 IPR000816 GO:0005829|GO:0006508|GO:0016920
Seca8g06520 221 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 11 219 IPR016125 -
Seca8g06520 221 FunFam Pyrrolidone-carboxylate peptidase isoform A 10 220 - -
Seca8g06520 221 Pfam Pyroglutamyl peptidase 13 198 IPR016125 -
Seca8g06520 221 CDD Peptidase_C15 12 219 IPR000816 GO:0005829|GO:0006508|GO:0016920
Seca8g06520 221 Gene3D - 9 220 IPR036440 -
Seca8g06520 221 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 12 219 IPR036440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06520 Seca-Chr8 159654606 159657293 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06520 K01304 - gmx:100305735 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06520 8 159654606 159657293 Seca8g06520 8 159654606 159657293 ECH
Seca8g06520 8 159654606 159657293 Seca2g05228 2 138787824 138790720 PCT