Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05228 ATGGGGTCAGAAGGTCCTACAACACCAATAACAACAATTCACATGACGGGATTTAAGAAATTCCATGGAGTTTCAGAGAATCCAACAGAAACAATTGTCAGCAATTTGACAGAGTACATGAATAAGAAGGGTTTGCCAAAAGGTTTAATTATTGGAAGCTGCAGCATTCTTGAGACTGCTGGTCAAGGAGCACTTGTTCCACTGTACCAGAGATTACAATCTGCCATTACTGCCAAGGACTCTGAATCTTCAAATTCCAATAGAATTATTTGGCTGCATTTTGGGGTTAACAGTGGTGCAACAAGGTTTGCTATAGAGAATCAAGCTGTCAACGAGGCTAATTTCCGTTGCCCTGATGAAATGGGATGGAAGCCCCAGAAAGTCCCCATTGTTCCTTCAGATGGTGGAATTTCTCGAATACGGGAGGTAAAATGA 435 0.4184 MGSEGPTTPITTIHMTGFKKFHGVSENPTETIVSNLTEYMNKKGLPKGLIIGSCSILETAGQGALVPLYQRLQSAITAKDSESSNSNRIIWLHFGVNSGATRFAIENQAVNEANFRCPDEMGWKPQKVPIVPSDGGISRIREVK. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05228 144 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 10 142 IPR016125 -
Seca2g05228 144 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 12 133 IPR036440 -
Seca2g05228 144 Gene3D - 10 141 IPR036440 -
Seca2g05228 144 FunFam Pyrrolidone-carboxylate peptidase isoform A 10 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05228 Seca-Chr2 138787824 138790720 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05228 K01304 - gmx:100789152 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05228 2 138787824 138790720 Seca2g05228 2 138787824 138790720 ECH
Seca8g06520 8 159654606 159657293 Seca2g05228 2 138787824 138790720 PCT