Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06513 ATGCCCTCCAAAGCTCTATATAAGCTGACATACCACTTCTCATTTTCCCTCACCAACCCAACAAACATTTCCAACATCTCTGAGTCCTTTGCAACTTTTCAAAGCTTTGCTTGTCTCATCTTTTTACATTTCAACAACAAAACACTACTCACTGACACCATGGCCCCTAACATCACCACCGCTACAGCCAAAGTCACCGACGATCAAGCTAAGGCCACCGGTGGCCGTGCCTTCGTGACCTTCCTGGCCGGAAACGGCGACTATGTGAAGGGTGTTGTTGGCTTAGCCAAGGGTCTGAGGAAGGTCAAAACCATATACCCTCTCGTAGTTGCAGTGTTACCAGATGTTCCTGAGGAGCACCGCAAGATTCTCACCTCCCAAGGATGCATTGTTAGAGAAATTGAACCGGTTTACCCGCCCGAGAATCAAACCCAGTTTGCCATGGCATATTATGTCATCAACTACTCCAAGCTACGTATTTGGGAGTTTGTGGAGTACAGCAAGATGATTTATCTTGACGGTGACATCCAAGTTTTTGAAAACATTGATCACTTGTTCGACTTGCCTAACAATTATTTCTATGCGGTGATGGACTGTTTCTGTGAGGCCACTTGGGGCCACACCCCACAGTATCAGATCGGTTATTGTCAGCAGTGCCCTGATAAGGTTCAGTGGCCCTCTAATTTTGGGCCCAAACCTCCTCTCTATTTCAATGCTGGCATGTTTGTTTTTGAGCCTGATTTGGCTACCTACCGTGACCTTCTTCAAACACTCAAAGTCACCAAGCCCACATCCTTTGCTGAGCAGGATTTCTTGAACATGTACTTCAAGGACAAATACAAGCCTATACCTAACATTTACAATCTTGTGTTGGCCATGCTGTGGCGTCACCCTGAGAATGTGGACCTTGACAAAGTGAAAGTGGTTCACTATTGTGCTGCTGGATCTAAGCCTTGGAGGTACACTGGGAAGGAAGAGAATATGGAGAGAGAAGATATAAAGATGCTGGTGAAGAAATGGTGGGATATATATGAAGATGAGAGTTTGGATTACAATTACAATCCCCTCAATGTGGATCGCTTCACTGCGGCGCTTTTGGAGGCTGGTGGTGTCAAGTTTGTCCCCGCTCCATCCGCCGCTTAA 1143 0.4628 MPSKALYKLTYHFSFSLTNPTNISNISESFATFQSFACLIFLHFNNKTLLTDTMAPNITTATAKVTDDQAKATGGRAFVTFLAGNGDYVKGVVGLAKGLRKVKTIYPLVVAVLPDVPEEHRKILTSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPNNYFYAVMDCFCEATWGHTPQYQIGYCQQCPDKVQWPSNFGPKPPLYFNAGMFVFEPDLATYRDLLQTLKVTKPTSFAEQDFLNMYFKDKYKPIPNIYNLVLAMLWRHPENVDLDKVKVVHYCAAGSKPWRYTGKEENMEREDIKMLVKKWWDIYEDESLDYNYNPLNVDRFTAALLEAGGVKFVPAPSAA. 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06513 380 CDD GT8_Glycogenin 76 346 - -
Seca8g06513 380 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 75 350 IPR029044 -
Seca8g06513 380 Pfam Glycosyl transferase family 8 80 322 IPR002495 GO:0016757
Seca8g06513 380 SUPERFAMILY Nucleotide-diphospho-sugar transferases 79 348 IPR029044 -
Seca8g06513 380 PANTHER GLYCOGENIN SUBFAMILY MEMBER 58 348 - -
Seca8g06513 380 FunFam Hexosyltransferase 74 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06513 Seca-Chr8 159579409 159581210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06513 54 380 Glycosyltransferase AT1G56600 74.852 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06513 K18819 - gmx:548050 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06513 8 159579409 159581210 Seca8g06513 8 159579409 159581210 ECH
Seca8g06513 8 159579409 159581210 Seca2g05234 2 138835844 138837578 PCT