Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05234 ATGGCACCTGATATCACCACCGCCGCTGCCAATGCCACCGCCGAGCAACCCAAGGCTGTCGGCGGGAGTGGCCGTGCCTTCGTGACTTTCCTGGCAGGGAACGGTGATTACATAAAGGGTGTTGTTGGTTTGGCCAAAGGACTCAGAAAGGCCAAGACCATATACCCTCTTGTGGTTGCAGTGTTACCAGATGTTCCAGAGGAACACCGTAAGATTCTCAATTCCCAAGGGTGCATTGTGAGGGAGATTGAACCTGTTTACCCGCCGGAGAATCAGACCCAATTTGCCATGGCCTATTATGTCATCAATTACTCCAAGCTACGTATTTGGGAGTTCGTGGAGTATAGCAAGATGATCTACCTAGATGGTGACATACAAGTTTTTGACAATATTGACCATCTGTTTGATCTGCCTGATGATTATTTCTATGCGGTGATGGACTGTTTCTGTGAGAAGACTTGGAGTCACACTCCTCAGTATCAGATTGGGTACTGTCAACAGTGCCCTGATAAGGTTCAATGGCCCTCTGATTTTGGTTCCAAGCCTCCTCTGTATTTCAATGCTGGGATGTTTGTTTTTGAGCCTAATTTGCTCACATACCGTGATCTCCTCCAAACAGTCCAAGTCACCAAGCCCACTTCCTTTGCTGAACAGGACTTTCTGAACATGTACTTCAAGGACAAATACAAGCCTATTCCTAATGTGTACAACCTTGTGCTGGCCATGTTGTGGCGTCACCCTGAGAACGTTGAACTTGACAAAGTTAAAGTGGTTCACTATTGTGCTGCTGGGTCTAAGCCTTGGAGGTACACAGGGAAGGAACAGAACATGGACAGAGAAGATATCAAGATGCTTGTGAAGAAATGGTGGGACATATATGAGGATGAGACATTGGACTACAACAAGCCACTCAATGTCGAACGCTTCACGGCGGCGCTATTGGAGGCTGGTGGCGTTAAATTTGTGCCCGCCCCTTCCGCCGCCTAA 987 0.4782 MAPDITTAAANATAEQPKAVGGSGRAFVTFLAGNGDYIKGVVGLAKGLRKAKTIYPLVVAVLPDVPEEHRKILNSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDDYFYAVMDCFCEKTWSHTPQYQIGYCQQCPDKVQWPSDFGSKPPLYFNAGMFVFEPNLLTYRDLLQTVQVTKPTSFAEQDFLNMYFKDKYKPIPNVYNLVLAMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEQNMDREDIKMLVKKWWDIYEDETLDYNKPLNVERFTAALLEAGGVKFVPAPSAA. 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05234 328 FunFam Hexosyltransferase 23 301 - -
Seca2g05234 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 299 IPR029044 -
Seca2g05234 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 28 297 IPR029044 -
Seca2g05234 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 24 295 - -
Seca2g05234 328 CDD GT8_Glycogenin 25 295 - -
Seca2g05234 328 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05234 Seca-Chr2 138835844 138837578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05234 1 328 Glycosyltransferase AT1G56600 75.444 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05234 K18819 - gmx:100800249 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05234 2 138835844 138837578 Seca2g05234 2 138835844 138837578 ECH
Seca2g05147 2 137923720 137925818 Seca2g05234 2 138835844 138837578 ECH
Seca8g06513 8 159579409 159581210 Seca2g05234 2 138835844 138837578 PCT