Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06510 ATGAACAGAATCGCCCTTATTCGCAACCGCGCCATGAAATCCGCCACTAGGATTCTCAGTGGTTCTAAGAATCCATCGTTTCATGTTGCAAAATGTCACCATATCCTTACCTTGGCTAACAATAATCTCAAACCTCGTTTCAATCACTACCCTTTTCGAATACTGGGGTTTCACCGCATAATAGTTTTTGACTTACCCTCTTCGAATTCTGGCCTTTCAACAACGAATAGGGATGTCTCCACCATTGCAAGAGTTGCCTTCAAGGTTCAAAATTTCTCGACTTCTGTTGAGACACGTGTCAATGATAGTAATTTTGAGAGGATTTACGTACAGGGTGGCATGAATGTGAAGCCAGTGGTGGTGGAAAGTGTTCATAAGGATGATGAGAATGTTGTAAGAGAAGAGGAGTCTCGGTTGAGAGTTGGGGCTGAAGATGTTAGCACCGAGAATTCAGGTGGTGGTCTGAATGTTACTCTGGTCGAGACCAGAGGGGAGGACACAGTTGTGGAAAAACAAGCGTGGAAGTTGTTGCAGGAAGCTGTTGTGACTTATTGTGACAACCCTGTGGGGACTGTGGCTGCAAAAGATCCAGGTGACAAGCAACTCCTGAATTATGATCAGGTCTTTATAAGGGATTTCATACCTTCAGCTCTTGCCTTCTTGCTTAGAGGAGAACATGAGGTTGTCAAGAATTTTCTTCTTCACACCTTGCAATTGCAGAGTTGGGAGAAAACAGTGGACTGCTACAGTCCAGGACAGGGTTTGATGCCTGCTAGTTTCAAAGTTAGAACTGTGGCTCTTGATGAAGATAAGCATGAAGAGGTTTTAGATCCTGATTTTGGGGAATCGGCTATTGGTCGTGTTGCACCTGTAGATTCAGGATTGTGGTGGATCATCCTGTTGCGGGCTTATGGGAAGCTCACTGGTGACTACAGCTTGCAAGAAAGGGTGGATGTTCAAACAGGCTTGAAAATGATCCTTAACTTGTGTCTAACAGATGGTTTTGATATGTTTCCTTCTCTGCTAGTCACTGATGGGTCTTGCATGATAGACAGGCGGATGGGAATTCATGGTCACCCCCTTGAAATCCAAGTGAGCAGTAACTACGCTATGTTTCTCATTCTTCTGGCATTATTTTACTCAGCTCTTCGCTGCTCACGTGAAATGCTTGGTGTAACTGATGGAACCAATAATCTCATTAGAGCCATTAACAACAGGCTCAGTGCACTATCATTCCACATTAGAGAATATTATTGGGTGGATATGAAGAAGTTGAATGAAATATACAGGTATAAAACAGAAGAGTACTCCATGGATGCAATCAACAAATTCAACATATATCCAGAACAGATTCCTTTTTGGGTAATGGATTGGATTCCAGAAAAAGGTGGGTATCTGATTGGGAATCTGCAGCCAGCTCACATGGATTTCAGGTTTTTCACACTTGGAAATCTCTGGTCAATTGTTTCATCTTTGGGCACCCCAAGACAGAACGAGGCTATTTTAAATCTGATAGAAGCAAAATGGGATGATCTTGTGGGCCATATGCCTCTTAAGATATGTTATCCTGCCTTGGATAATGAAGAGTGGCGCATAATTACTGGCAGCGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCAACCCTTTTGTGGCAGTTCACGCTGGCATGCATCAAAATGGGGAGAATTGAACTAGCCCAGAAAGCAGTTGCATTGGCTGAGAAAAGACTGCCAGTTGATTCTTGGCCTGAATACTATGATACCCGAACTGGAAAATTTATTGGAAAACAATCCCGGCTGTATCAAACATGGACCATTGCTGGGTTCCTTACATCCAAGATGCTATTGAAGAATCCTAAAATGGCATCCATGTTGTTCTGGGAGGAGGATTATGAGCTTCTTGATATATGTGTTTGTGGACTTAGCAAGAGTGGCAGGAGAAAGTGCTCTCGTATTGCTGCCAAGTCTCAGATTCTTGTGTAA 1998 0.4329 MNRIALIRNRAMKSATRILSGSKNPSFHVAKCHHILTLANNNLKPRFNHYPFRILGFHRIIVFDLPSSNSGLSTTNRDVSTIARVAFKVQNFSTSVETRVNDSNFERIYVQGGMNVKPVVVESVHKDDENVVREEESRLRVGAEDVSTENSGGGLNVTLVETRGEDTVVEKQAWKLLQEAVVTYCDNPVGTVAAKDPGDKQLLNYDQVFIRDFIPSALAFLLRGEHEVVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVALDEDKHEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYSLQERVDVQTGLKMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQVSSNYAMFLILLALFYSALRCSREMLGVTDGTNNLIRAINNRLSALSFHIREYYWVDMKKLNEIYRYKTEEYSMDAINKFNIYPEQIPFWVMDWIPEKGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPRQNEAILNLIEAKWDDLVGHMPLKICYPALDNEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRIELAQKAVALAEKRLPVDSWPEYYDTRTGKFIGKQSRLYQTWTIAGFLTSKMLLKNPKMASMLFWEEDYELLDICVCGLSKSGRRKCSRIAAKSQILV. 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06510 665 Gene3D - 200 615 IPR012341 GO:0005975
Seca8g06510 665 FunFam probable alkaline/neutral invertase B 199 617 - -
Seca8g06510 665 SUPERFAMILY Six-hairpin glycosidases 173 616 IPR008928 GO:0005975
Seca8g06510 665 PANTHER - 103 650 IPR024746 GO:0033926
Seca8g06510 665 Pfam Alkaline and neutral invertase 173 624 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06510 Seca-Chr8 159543213 159547476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06510 - - gmx:100785091 1079.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06510 8 159543213 159547476 Seca2g05239 2 138859323 138862478 ECH
Seca8g06510 8 159543213 159547476 Seca8g06510 8 159543213 159547476 ECH
Seca8g06510 8 159543213 159547476 Seca2g05239 2 138859323 138862478 PCT