Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05239 ATGAAACTATCTTCTAGGATTCTTGTTGGTTACAGGAATTCATCATTTCTTGCAAAATGTCACCATACTCTTACTATGTCTATGCCAATGTCAATATCTAACTCTAATTCTTTTAGTCACAACAGCATGCAGTGCCCTTCTCGCATGTTGGAGTTTGGACGGATAATAAATGGTACCCCTAAAGTTTTTGGGTTACCCTCTTCGAGTTTAAGCGCAACAAGAACAAAAGAGGTTATCTTTGCTATTTCTGGAATTGCCTTCAAGGCTCGTGACTTCTCAAGCTCCATTGAGACCCGTGTCAATGACAACAATGATGAGAGGGTTTATGTAAAGGGTGGCATGAATGTGAAGCCATTAGGGGTGGATAAAGATGATAAGAATGAAGGAGGAGAGGAAGAGTCTCGGTTAGAAGTTGGTGAGGAGGGAGATGTGAAGGCAGGGAATTCAGGTGGTTTCAAGAATGTATCTGAGTCCAAGAACAATGATGATGATGATGAGGAGGAGGAGACAGAGGTAGAAAAAGAGGCATGGAAGTTATTGCAGAAAGCGCTTGTGACATATTGTGACACCCCTGTGGGAACTGTGGCAGCAAATGATTCAACTAGCCAGCAACCCTTGAATTATGATCAGGTCTTTATTAGGGATTTTATCCCTTCAGCTCTTGCTTTCTTGCTCAAGGGAGAAAAAGAAATTGTCAAGAATTTTCTCCTTCACACCTTGCAACTCCAGAGTTGGGAGAAAACAGTGGATTGCTATAGCCCAGGACAAGGCTTGATGCCTGCTAGTTTCAAAGTTAAAACTACTAAAGTTGAAGAAAAGAAAGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATTGGTCGTGTTGCTCCTGTAGATTCAGGGTTGTGGTGGATCATCCTGCTGCGAGCTTATGGGAAGATCACTGGTGACTATAGCTTGCAAGAAAGATTGGATGTTCAGACAGGCTTACATATGATCCTTAACTTGTGTTTAACAGATGGATTTGATATGTTTCCTTCTTTGTTAGTAACTGATGGATCTTGCATGATAGATAGGAGGATGGGTATTCATGGTCACCCTCTTGAGATTCAAGCGTTATTTTACTCAGCACTTCGCTCTGCACGTGAGATGGTTGCCATAGATGAGGGATCTAAGCATCTGGTTGGAGAAATTATCAACAGACTCAGTGCATTATCTTTCCACATTAGAGAATATTATTGGTTGGATATGAATAGGGTTAATGAGATATACAGGTATAAAACAGAAGAGTATTCCTTGGATGCCACTAACAAGTTCAACATTTATCCAGAACAAATTCCTATGTGGCTAATGGACTGGATTCCAAAGGAAGGTGGATATCTGATAGGGAATCTACAACCAGCTCACATGGATTTCAGGTTTTTCATGCTTGGAAATCTTTGGTCTATTGTTTCCTCTTTGGGTACCCCAAGACAGAATAAGGCTATTTTGAATCTCATAGAAGCAAAATGGGGTGATCTCGTGGGGCAAATGCCTCTTAAGATATGTTACCCTGCCTTGGAGGATGAGGAATGGCGCATAATCACTGGCAGTGATCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCTACCCTTCTGTGGCAGTTTACATTGGCATGCATCAAAATGGGGAGAACTGACCTTGCTCAAGAGGCCATTGCTTTAGCTGAGAAAAGACTACCATTTGATTCTTGGCCTGAATATTATGACACCCGCACAGGAAGGTTTATTGGAAAACAAGCCCGGTTTTATCAAACATGGACATTAGCTGGATTCCTTGCATCTAAGATGCTTTTGAAGAATCCTAAAATGGCATCCATGTTATGCTGGGATGAGGATTTTGAGATTCTTGAGACATGTGTTTGTATACTTAATAAGAGTGGTAGGAAAATATGCTCCCGTAATGTTGCAAAGTCACATATTCTCGTCTGA 1968 0.4126 MKLSSRILVGYRNSSFLAKCHHTLTMSMPMSISNSNSFSHNSMQCPSRMLEFGRIINGTPKVFGLPSSSLSATRTKEVIFAISGIAFKARDFSSSIETRVNDNNDERVYVKGGMNVKPLGVDKDDKNEGGEEESRLEVGEEGDVKAGNSGGFKNVSESKNNDDDDEEEETEVEKEAWKLLQKALVTYCDTPVGTVAANDSTSQQPLNYDQVFIRDFIPSALAFLLKGEKEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKTTKVEEKKEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYSLQERLDVQTGLHMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMVAIDEGSKHLVGEIINRLSALSFHIREYYWLDMNRVNEIYRYKTEEYSLDATNKFNIYPEQIPMWLMDWIPKEGGYLIGNLQPAHMDFRFFMLGNLWSIVSSLGTPRQNKAILNLIEAKWGDLVGQMPLKICYPALEDEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRTDLAQEAIALAEKRLPFDSWPEYYDTRTGRFIGKQARFYQTWTLAGFLASKMLLKNPKMASMLCWDEDFEILETCVCILNKSGRKICSRNVAKSHILV. 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05239 655 Pfam Alkaline and neutral invertase 176 614 IPR024746 GO:0033926
Seca2g05239 655 Gene3D - 194 604 IPR012341 GO:0005975
Seca2g05239 655 PANTHER - 132 638 IPR024746 GO:0033926
Seca2g05239 655 SUPERFAMILY Six-hairpin glycosidases 175 606 IPR008928 GO:0005975
Seca2g05239 655 MobiDBLite consensus disorder prediction 111 172 - -
Seca2g05239 655 FunFam probable alkaline/neutral invertase B 202 607 - -
Seca2g05239 655 MobiDBLite consensus disorder prediction 118 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05239 Seca-Chr2 138859323 138862478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05239 - - gmx:100812691 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05239 2 138859323 138862478 Seca2g05239 2 138859323 138862478 ECH
Seca8g06510 8 159543213 159547476 Seca2g05239 2 138859323 138862478 ECH
Seca8g06510 8 159543213 159547476 Seca2g05239 2 138859323 138862478 PCT