LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca8g06485	ATGGCTGGTGTCTCAGAAAATGAACGTCGACGGATCATGGTGGCCATCGATGAAGGTGAGGAGAGCTTGTACGCTCTCTCATGGTGCCTCAAGAATCTACTTTTCCAAGATTCCAAAGACTCCCTTATCCTCCTCTACGTCAAGCCTCCTCGTGCCGTTTATTCCGCCTTCGATGGCACAGGGTACCTCTTTTCTTCTGACATAACGGCAACCATGGAGAGGTATAGCCAACAAGTGGCTGATTCCGTCTTAGAGAAAGCCAAGAGATTGTGTAACAATATTGAAAATTGGTTAATGAAGGTGGAGACGAAGGTAGAGAATGGTGACCCCAGGGACGTGATCTGTCAGATGGTTCAAAGGTTGGGTGTTGATATCTTAGTGATGGGAAGCCATGGGTATGGTGTCATCAAGAGGGCTTTCCTTGGAAGTGTGAGCAATTACTGCGCACAGAATGTGAAGTGCCCGGTTTTGATAGTGAAGAAGCCAAAATCAAATGCTGGAGGAGGAGACATATAA	516	0.469	MAGVSENERRRIMVAIDEGEESLYALSWCLKNLLFQDSKDSLILLYVKPPRAVYSAFDGTGYLFSSDITATMERYSQQVADSVLEKAKRLCNNIENWLMKVETKVENGDPRDVICQMVQRLGVDILVMGSHGYGVIKRAFLGSVSNYCAQNVKCPVLIVKKPKSNAGGGDI.	172

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca8g06485	171	Pfam	Universal stress protein family	9	160	IPR006016	-
	Seca8g06485	171	Gene3D	HUPs	4	168	IPR014729	-
	Seca8g06485	171	PANTHER	ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN	10	161	-	-
	Seca8g06485	171	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	10	162	-	-
	Seca8g06485	171	CDD	USP_Like	11	159	-	-
	Seca8g06485	171	PRINTS	Universal stress protein signature	120	132	IPR006015	-
	Seca8g06485	171	PRINTS	Universal stress protein signature	9	27	IPR006015	-
	Seca8g06485	171	PRINTS	Universal stress protein signature	138	160	IPR006015	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca8g06485	Seca-Chr8	159219281	159220754	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca8g06485	-		-	gmx:100305594	280.026

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Seca8g06485	8	159219281	159220754	Seca2g05107	2	137540611	137541647	ECH
	Seca8g06485	8	159219281	159220754	Seca8g06485	8	159219281	159220754	ECH
	Seca8g06485	8	159219281	159220754	Seca2g05253	2	139129401	139131758	PCT