Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05253 ATGAGTGAAGAAGCAAAAACGGAACGGCGGGTGGTGGTAGCGGTGGACGAAGGGGAGGAGAGCATGCACGCCCTTTCTTGGTGCCTCAACAACATTGTTTTCCAAAATTCCAAAGATACCCTCATCCTTCTATACGTCAGGCCCCCTCACGCCCTTTACACTCAATTAGATGATCCTGAACCTCAAGAACATGTATTTTCCTCGCAAATAAGCGCAGCCATGGAGAAATATAGCCGAGAAGTGGCCGATTGCGTCTTAAAGAAAGCCAAGACATTGTGTAAAAATCTTCAACAGGTTAAGGTGGAGACAAGGGTAGAGAATGGCGACCCAAGGGAAGTGATCTGTCAGATGTCTGAAAAGTTGGCCGCCGACGTGCTAGTCATGGGAAGCCACGGCTATGGTCCCGTCAAGAGGGCTTTCCTTGGAAGTGTGAGCAATTACTGCGCACAGAACGTCAAGTGCCCAGTTTTGATAGTCAAGAAGCCCAAATCAACTCCTGGTGCTGGAGATGGATTATTATGA 522 0.4847 MSEEAKTERRVVVAVDEGEESMHALSWCLNNIVFQNSKDTLILLYVRPPHALYTQLDDPEPQEHVFSSQISAAMEKYSREVADCVLKKAKTLCKNLQQVKVETRVENGDPREVICQMSEKLAADVLVMGSHGYGPVKRAFLGSVSNYCAQNVKCPVLIVKKPKSTPGAGDGLL. 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05253 173 CDD USP_Like 10 159 - -
Seca2g05253 173 Gene3D HUPs 3 169 IPR014729 -
Seca2g05253 173 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 162 - -
Seca2g05253 173 PRINTS Universal stress protein signature 138 160 IPR006015 -
Seca2g05253 173 PRINTS Universal stress protein signature 8 26 IPR006015 -
Seca2g05253 173 PRINTS Universal stress protein signature 120 132 IPR006015 -
Seca2g05253 173 Pfam Universal stress protein family 9 160 IPR006016 -
Seca2g05253 173 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 8 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05253 Seca-Chr2 139129401 139131758 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05253 - - gmx:100804158 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05253 2 139129401 139131758 Seca2g05253 2 139129401 139131758 ECH
Seca8g06485 8 159219281 159220754 Seca2g05253 2 139129401 139131758 PCT