Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06046 ATGAGGCTACAACAACCACTCAACTTGTTACTAGTGTTATTTTTCTTGCTTTTTGTTGCTAGTTTTCCTTCCAAAGCAAATGGGTCTCTGCTACTACCATTCCTAGATCCTCCTTCCAGTCTCTTGTCTGATCTTTGGTCTGATCGGTTCCCAGACCCATTTCGTGTGCTTGAACAAATTCCATTTGGGGTTGACAAAGATGAACCATCCATGGCTCTGTCACCTGCTAGAGTAGACTGGAAGGAGACACCAGAGGGACATGTTATAATGCTGGATGTGCCAGGGTTGAAGAGAGATGAGATAAAGATAGAAGTGGAACAGAATAGGGTCCTGAGAGTGACTGGAGAAAGGAAGAAGGAGGAAGAAAAGAAAGGGGATCACTGGCACAGAATGGAGAGGTCCTATGGAAAATTCTGGAGGCAGTTCAGGTTGCCAGAAAATGTGGACTTAGATTCTGTCAAGGCTAAGCTGGAGAATGGGGTGCTTACTTTGACACTGAACAAGTTGTCACCTGATAAGATCAAAGGTCCCAGGGTGGTGAGCATTGCAGGGGAGGATGAGAAACCAGCCAAGCTTAGCAATGATGGGGCCAAGCAGGAGCTTTGA 606 0.4604 MRLQQPLNLLLVLFFLLFVASFPSKANGSLLLPFLDPPSSLLSDLWSDRFPDPFRVLEQIPFGVDKDEPSMALSPARVDWKETPEGHVIMLDVPGLKRDEIKIEVEQNRVLRVTGERKKEEEKKGDHWHRMERSYGKFWRQFRLPENVDLDSVKAKLENGVLTLTLNKLSPDKIKGPRVVSIAGEDEKPAKLSNDGAKQEL. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06046 201 ProSiteProfiles CS domain profile. 73 180 IPR007052 -
Seca8g06046 201 MobiDBLite consensus disorder prediction 179 201 - -
Seca8g06046 201 SUPERFAMILY HSP20-like chaperones 69 179 IPR008978 -
Seca8g06046 201 CDD ACD_ScHsp26_like 77 168 - -
Seca8g06046 201 Pfam Hsp20/alpha crystallin family 79 182 IPR002068 -
Seca8g06046 201 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 67 185 IPR002068 -
Seca8g06046 201 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 67 179 IPR031107 -
Seca8g06046 201 MobiDBLite consensus disorder prediction 178 201 - -
Seca8g06046 201 Gene3D - 36 190 IPR008978 -
Seca8g06046 201 FunFam 22.0 kDa heat shock protein 39 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06046 Seca-Chr8 154078557 154079162 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06046 K13993 - gmx:100500319 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04305 10 97504350 97510874 Seca8g06046 8 154078557 154079162 PCT