Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04305 ATGAGGCAACAAGCATTGAACTTGGTACTAGTGCTACTGACTTTGCTTGTTCTAGCTGGTTTTCCATCCAAAGCAAATGGTTCTCTGCTACCATTTATTGATTATCCAGGAAATCTCTGGGCTGATCGCTTCCCTGATCCATTCCCTGATCCATTCCGTGTCATTGAGCAAATGCCATTTGGGGTTGACAAATATGAGCCATCCATGGCCCTCTCACCAGCAAAAGTGGATTGGAAGGAAACACCAGAGGGACATGTTATAATGCTTGATGTGCCAGGGTTGAAGAAAGATGAGATCAAGATAGAAGTGGAAAGGGACAGGATGCTGAGAGTTAGTGGAGAAAGGAAGAAGGAAGAGGAGAAGGAAGGGGATCATTGGCACAGAGTGGAGAGATCCTATGGGAAATTCTGGAGGAGGTTCAGGTTGCCAGATAATGTGTATTTGGATTCTGTGAAGGCTAAGTTGGAGAATGGAGTGCTTACTGTGACATTGAACAAGTTGTCACCTGATAAGATAACAGGTCCAAAGGTGGTGAGCATTACAGGGGAAGATGAGCAGCCAGCCAAGCTCAATGTCAAGGGTAATGAGGCCAAGCAGGAGAATTGA 606 0.4554 MRQQALNLVLVLLTLLVLAGFPSKANGSLLPFIDYPGNLWADRFPDPFPDPFRVIEQMPFGVDKYEPSMALSPAKVDWKETPEGHVIMLDVPGLKKDEIKIEVERDRMLRVSGERKKEEEKEGDHWHRVERSYGKFWRRFRLPDNVYLDSVKAKLENGVLTVTLNKLSPDKITGPKVVSITGEDEQPAKLNVKGNEAKQEN. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04305 201 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 61 174 IPR031107 -
Seca10g04305 201 Gene3D - 38 189 IPR008978 -
Seca10g04305 201 ProSiteProfiles CS domain profile. 71 178 IPR007052 -
Seca10g04305 201 Pfam Hsp20/alpha crystallin family 77 180 IPR002068 -
Seca10g04305 201 MobiDBLite consensus disorder prediction 180 201 - -
Seca10g04305 201 FunFam 22.0 kDa heat shock protein 35 180 - -
Seca10g04305 201 CDD ACD_ScHsp26_like 75 166 - -
Seca10g04305 201 SUPERFAMILY HSP20-like chaperones 63 176 IPR008978 -
Seca10g04305 201 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 65 183 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04305 Seca-Chr10 97504350 97510874 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04305 K13993 - gmx:547971 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04305 10 97504350 97510874 Seca10g04305 10 97504350 97510874 ECH
Seca10g04305 10 97504350 97510874 Seca8g06046 8 154078557 154079162 PCT