Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06023 ATGGCCCTTGAAACCCTCCTCGTGAAGGTCAAAACCGCCATTTCCAACAGCTTCGACTCTGTTCCACCGAAGCTTCTAAAGAAAAAACCTTCCTTCAAGTCCAAACGAAACGTCGGCGTTTTAGCCTTTGAGATCGCTGGCGTCATGTCAAAGCTTCTCCACCTTTGGCAGTCACTCTCCGACGCCACCATCGTTCGAATCCGCAACGACGCCGTCACGCTCGAGGGCGTTCGGAAGATCATTTCCAACGACGAGTCGTTTCTACTTGGACTCGCTTGTGCTGAGTTCGCTGAGAGTCTCCGACTCGCTGCTAACTCGGTTACTCGACTCAGTCACCGGTGTGAGGACCCAAACCTCAAGTCCTTCCACCGGGCTTTTCTCGAGTTCGCTGACTCGGGCCGTGACCCACACGGGTGGGCCCTTTCGGGCCCAAAGGAAACCGAAGCCAAGCTCAAGAAAATGGAGCGTTACGTGACACTCACGGCAACTCTTCACCGCGAAATGGAAGAGCTTTCTGTTTTGGAAAGTGGGTTCAGGAAAGTTTTGAATCATAACAATCATCATAGTGATAACAACAACAATGAAGGTTCTTTGGTTGGGAAAGAGCAGAAACTTTATGAACTTCAGCAAAAGATCTTTTGGCATAAACAAGAGGTTAAGGATCTGAAAGAAAGGTCCTTATGGAATAGAAGTTATGATGGTGTTGTTATCTTGCTTGTGAGGTTTAGTTTCACTGTTTTAGCAAGGATTAAGGTTGTGTTTGGGATTGGCCATTCTATGCCATGTTTGTCTCGTAGTTTGTCAACTTCTGCCACTGTTTATCCCACGGATCAGAACGCTAATTCTTGTGATGAATTCGTTTCTGGGTCATTGGAAAGATCAGAGCTTGATGAGAATAAAGAAGGTTTGGGAAGTGGGTTTTTTGAGTCCAACTCTGAGCTTTTGAAACCACCCCCTAGTACTTTAGGTGCTGCAGCTTTGGCTTTGCACTATGCAAATTTGATCATAGTGATGGAGAAAATGATAAAGTCACCACATTTGGTTGGTTTGGATGCTAGGGATGATTTGTATGGTATGTTACCAAGTAGTATAAGGTCAGCTTTGAGGGCAAGGTTGAAAGGAGTGGGGTTTTGTGCTAGTGATCCTGTGCTTGCTGGTGAATGGAGGGATGCTTTGGGGAGGATATTGGGGTGGTTGTCACCTTTGGCACATAATATGATCAAGTGGCAAAGTGAAAGAAGCTTTGAGCAGCAAAATTTGGTGCCTAAGACCAATGTGTTGTTATTGCAGACTTTGTTCTTTGCAAACAAGGAGAAGACAGAGGCTGCCATAACTGAATTGCTTGTTGGGTTAAACTATATTTGGAGGTTTGAGAGGGAAATGACTGCTAAGGCATTGTTTGAATGTGCCAATTTCAATGGGTTGTTAAAAATGCAAAAACCAAACCCAGTTAATTAA 1458 0.4499 MALETLLVKVKTAISNSFDSVPPKLLKKKPSFKSKRNVGVLAFEIAGVMSKLLHLWQSLSDATIVRIRNDAVTLEGVRKIISNDESFLLGLACAEFAESLRLAANSVTRLSHRCEDPNLKSFHRAFLEFADSGRDPHGWALSGPKETEAKLKKMERYVTLTATLHREMEELSVLESGFRKVLNHNNHHSDNNNNEGSLVGKEQKLYELQQKIFWHKQEVKDLKERSLWNRSYDGVVILLVRFSFTVLARIKVVFGIGHSMPCLSRSLSTSATVYPTDQNANSCDEFVSGSLERSELDENKEGLGSGFFESNSELLKPPPSTLGAAALALHYANLIIVMEKMIKSPHLVGLDARDDLYGMLPSSIRSALRARLKGVGFCASDPVLAGEWRDALGRILGWLSPLAHNMIKWQSERSFEQQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYIWRFEREMTAKALFECANFNGLLKMQKPNPVN. 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06023 485 PANTHER BNAC09G50660D PROTEIN 32 470 - -
Seca8g06023 485 Pfam Domain of unknown function (DUF3475) 40 95 IPR021864 GO:0045927
Seca8g06023 485 Pfam Protein of unknown function (DUF668) 321 408 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06023 Seca-Chr8 153837459 153838916 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06023 - - gmx:100787581 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06023 8 153837459 153838916 Seca8g06023 8 153837459 153838916 ECH
Seca10g04273 10 96557036 96558496 Seca8g06023 8 153837459 153838916 PCT