Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04273 ATGGCCCTCGAAACGTTGCTCATAAGGGTGAAAACCGCTTTATCCAACAGCTTCGACTCAGTGCGACACTCAAACCCGAAGAAAACAACGAAGCAAAAACGCATCGCCGTTTTGGCGTTTGAGATAGCCGGCGTGATGTCGAAGCTCCTACACCTATGGCAATCCCTCTCCGACGCCAACGTCGTTCGCCTCCGAAACGACGCCGTTTCCATTGAAGGCGTTTGGAAGCTCATCTCAAACGACGAGTCGTTCCTTCTAAAACTCGCCGTCGCTGAGTTCGCCGACTCGCTCCGACTCGTCGCTGACTCGGTCTCCCGACTCAGTCTCAAGTGCCGCGATCCCACCCTCCGATCCTTCCACCGAGTCTTCACCGAGTTCGCTGACTCGGGCCACGACCCACACTCATGGACCCTCACAAACCCCAAAGAAATCGAAGCCAAACACAAGAAATTGGAACGTTACGTGACACTCACGGCAACACTTCACAGAGAAATGGACGAGCTTTCGCTTTTGGAAAGCGCGTTGAGAAAAGCACTTCACCACAACAACAACAAAAACCACCACCACGAAACCGAACCCTGTTCCCTTGCAAATAACAATAAGGATCACCACAAAATTTCTGATCTTCAGAGCAAGATTTTCTGGCAGAAGCAAGAGGTTAAGAATCTCAAAGAACGATCTTTATGGAACAAAGGGTTTGATAGTATTGTTCTGTTGCTAGCAAGTTCTGTTTTCACTGTGTTAGCAAGGATTAAGGTTGTTTTTGGAATTGGGCACCATGTACCTTATTTATCTCGAAGCTTATCAGCTTCTGCTACTGTTTACCCCTCTGATCATCAAAACCCTACCCCTTCTTGTAACTTTGTATCTGGGCCGTTGGAAAGTTCAAAACTTGATGAGAAAAAAGAGGATTTGGGAAGTGGGTTTTTTGAGTCTAATTGCAAGGTGTTAAAGCCACTAGCAGGGACTTTAGGTGCTTCAGCTTTGGCTTTGCATTATGCTAATTTGATTATTGTGATGGAGAAGATGATAAAGTCACCTCAATTGGTTGGTGTGGATGCAAGGGATGATTTGTATGCTATGCTACCAAGCAGTATAAGGTTATCTTTGAGATCAAGGTTGAAAGGAGTTGGGTTTTCTGCTTGTGATCCTGTTCTGGCTGGTGAGTGGAGAGATGCATTGGGGAGGATACTTGGGTGGTTGTCACCTTTGGCACATAATATGATTAAGTGGCAGAGTGAAAGGAGCTTTGAGAAACAGAGTTTGGTTCCCAATAAGACCAATGTTTTGCTTTTGCAGACTTTGTTCTTTGCAAATAAGGAGAAGACAGAAGCTGCCATAACTGAGCTGCTTGTGGGTTTGAACTATATTTGGAGGTTTGAAAGGGAAATGACTGCTAAGGCATTGTTTGAAAAATGCACCAATTTCAATGGATTGTTGAGCTTGCAGAAACCCAGCTAA 1461 0.4545 MALETLLIRVKTALSNSFDSVRHSNPKKTTKQKRIAVLAFEIAGVMSKLLHLWQSLSDANVVRLRNDAVSIEGVWKLISNDESFLLKLAVAEFADSLRLVADSVSRLSLKCRDPTLRSFHRVFTEFADSGHDPHSWTLTNPKEIEAKHKKLERYVTLTATLHREMDELSLLESALRKALHHNNNKNHHHETEPCSLANNNKDHHKISDLQSKIFWQKQEVKNLKERSLWNKGFDSIVLLLASSVFTVLARIKVVFGIGHHVPYLSRSLSASATVYPSDHQNPTPSCNFVSGPLESSKLDEKKEDLGSGFFESNCKVLKPLAGTLGASALALHYANLIIVMEKMIKSPQLVGVDARDDLYAMLPSSIRLSLRSRLKGVGFSACDPVLAGEWRDALGRILGWLSPLAHNMIKWQSERSFEKQSLVPNKTNVLLLQTLFFANKEKTEAAITELLVGLNYIWRFEREMTAKALFEKCTNFNGLLSLQKPS. 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04273 486 Pfam Protein of unknown function (DUF668) 323 410 IPR007700 GO:0045927
Seca10g04273 486 PANTHER BNAC09G50660D PROTEIN 29 471 - -
Seca10g04273 486 Pfam Domain of unknown function (DUF3475) 37 92 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04273 Seca-Chr10 96557036 96558496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04273 - - ahf:112801716 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04273 10 96557036 96558496 Seca10g04273 10 96557036 96558496 ECH
Seca10g04273 10 96557036 96558496 Seca8g06023 8 153837459 153838916 PCT