Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05835 ATGGCGCCTAGCCGCAGAAAAGGCGCCAGAAAAGCTGCGGCGGCTGCCGCCGCTCGCCGCCAATGGAAAGTGGGCGATCTCGTGCTTGCTAAAGTTAAGGGGTTCCCTGCATGGCCTGCCACGGTCAGTGAGCCAGAGAAGTGGGGTTACTCCAATGATTGGAAGAAAGTGCTCGTTTACTTCTTTGGAACCCAACAAATAGCTTTCTGCAATCCTGCTGATGTGGAAGCTTTTACTGAGGAGAAAAAACAGTCTCTTCTCGTCAAACGTCAAGGAAAGGGTGCTGACTTTGTTCGGGCTGTTCAAGAGATTGTTGATAGTTATGAGAAATTAAAAAAAGAGACTCAACTTGATGAAGCTAGCTGTGGTGGTAATGTTGCTGACGCAAATGTTTCAAGTCCAGTTAACTCAACTGCCAAGGATCAGACAGATGCTCCTGAGTTGACACAAACTTTACCAATGAAATCTTCAAATTCTGTTATTGACAGGCATGAGTTGGTATGTGCAGCTGAGGATGACTCAGCTGCTGTATTGAGGGATGAATCTTATAATAAGGAGGCATCATTGGAGGAGCCTGCTGATAATGTTGCTGCTGTACAATCGCCTAAGCCAGTTACTTACTCTTCTCGAAAAAGATCTGCTGGTGACCTGTGCCCACAGGGTGGTTTAACACAGAGACATACACCAGTACGGAGGTCTAGAAGCTCATCACGGGTCCAAAACTTTGTGTTGCCTTGTAGTGATGGTGGAAAGAGCACTGGCAACCTATCAACTAATGCAACACAGAGTGCACCTGTAAGAAAGAATAAACGTGGTAGGAAATCACCTGATCTTTCTGGCTGTAATGATTTTGATTCTTCTGCTTTTGTCTCAAATGGTAGCATGGAGGACAATAGCTCTGAAATTCTCACAATCGATTCTGATGCATTTAGCTTGAATGATGGTAGTGCAATAGATTCAAATTTTAAACTTGAACACACTGAAAATATTGAATGCCCAGAAGAAGTTGAGTTGAACAAAGGGTTTGATCTTGAAATGAAGGCTGTAGTCAACAAGAAGAAAAGAAAACCAAATAGGAAGAGGGCAACCAACGGTGCTTCCAAGCCGACCAGTAGACTAGAGAAGGAGACTTGTGTGCAGAATGCCAGTCAAAGTTCACAGGATGTTTGTGGAAATTCTAAAGAGAGGTGCTTTGAGCAAGATGGAGATGAACACTTACCCCTTGTGAAACGATTGAGAGTCAGGATGGGTAAATCATCTTCCACCGAGGCAGAACTCTATAGCAATCCACAAGCTCAAGTAAAAAGCTGTAAGGAAGATATTAACTCACCACAGCAGATGATCACATCCTCAAATTGTGAGAATGGTAGCTCTGCTGATGGAGACTCATCTGTGCTGAATGGAACTTTGGATAATGTTTCTCCTTCAAAGCTTTTAGCTCCATGTTCTAACACTCAAGTTTGTACTGCTAAGAAAGATCAAACATTCTGCTTTGTGGATGGTGAAGCTGCTTTACCACCATCTAAACGCCTCCATCGTGCTTTAGAAGCCATGTCAGCTAATGCTGCTGAAGAAGGTCAAGCTCATGTGGAAGGATCATCCTCCATAATGACATCAAGTGGCATGTGTTGTATATCTGCTGTCAAGAGATGTCCATGTATGGCCAATAATAATCAAGAAGATGATGGTTTATGTTCGCAAAAGTCGGATGCTTGCGGCATTGATTCTTCTCATATCAATCTGTATAATTTGTCAACCAATTCAAATCCAATGATTTCAACAGTGAATACATCATCCGAACTGATGGATGAGCAGTTGGTCAATTTCCAACAGCATGAAACTGGCAAGGATATTCTCCCAGGAGCTGCAGATCAAGTTGTTGAAGAGCTTAGTGATCATGTGGTTTGTCAGACTGCTAATGCAGATTTGAAAATTCAGTTACATGGACATATTTCTCCTAATCTTGATTCGAAATGTTGTGTAGTTGGAAGCAATCAAGATTCACCAGATCCATCATTACCACCAAATGATGAAGACAATATTACAACTGTGAATAATTCAAATACAGCATCTGATGCATCAGAACACAATGGAATAAGCCTTCAACCTGCAGTTGACGTGAACAAGAATGATATTATTTTACCTCAAAATAATATTGATATGCCTCATAATGAGGTTGCTTTTTGTGAGGATACAAATTGCTTGAAGCCAGCAGTTGGTGACGTTAACAAAGCAAATGATTTGAGTGTGGTTGTGAGAGAGATAAAATGCAAAGGACCAGAGGAGGATATGAATTCTGTTTCAACATCTGATAACTGTTTGGGTGAAAAGGGTAATTTGGCCATTCGGTCAAGTCCATCCTTGACAGACGGGGGAGACTGCGTTCCACAAGGATCACCTCCAAACACGTCAGTATGCAATGTTTCTACATCAGACAGTAGTAATATCCTTCAGAATGGAAGTTGTAGCCCTGATGTACATTTGCACCAGAAGCAAACTTCATCTGGTCCTGTTGATGGAAGTAAAAATGGGTATGTGGCTACTCAACAATCAAGATCCATGGGCAAGTCAACTGAAGCAGGACGTGCTGCTTTATTGTACTTTGAAGCAATGCTTGGGACTTTGACAAGGACAAAGGAAAGTATTGGTCGAGCAACACGCATAGCTATTGACTGTGCAAAGTTTGGCATTGCAGCTAAGGTCATGGAAATTCTTGCTCACAATCTGGAAACTGAATCAAGCATGCATCGGAGGGTGGATTTGTTTTTTCTTGTTGACTCCATTGCACAGTCTTCTCGAGGTTTAAAAGGTGATGTTTGTGGAGTATATCCATCTTCTATCCAAGCAGTCCTTCCACGACTATTATCTGCAGCCGCTCCTCCTGGAAATAGTTCACAAGAAAACCGTAGGCAGTGTCTCAAGGTTTTAAGGCTGTGGTTGGAAAGAAAAATCCTCCCGGAATCCATTATTCGTCATCATATCCGGGAACTGGATGTATATGTCAGTTCAGCTTCTGCAGGTGTCTTTTCACGACGAACATTAAGAACAGAGCGAGCTTTAGATGACCCTGTTAGAGAAATGGAGGGCATGCTTGTTGACGAATATGGAAGCAACTCAAGTTTTCAGCTACCTGGATTTTGCATGCCCCGAATGCTTAAAGATGACGATGAAGGGAGTGATTCTGATGAAGGAAACTTTGAGGCTGTCACGCCTGAGCATAATTCTGAAATACATGAAATGACTTCTACAATTGAAAAACACAGGCATATCTTAGAGGATGTTGATGGTGAGCTTGAAATGGAAGATGTTGCTCCCTCTTGTGATGTTGAAATGAATTCATTTTGCAATGTTGATAGAGGAAATGCCACACAGTTGGAGAAGAATCTTCCGTTGGCCTTTGCTCCTCTACCTCAGGACATGGCTCCATCTTCTCCACCACCACCACCATCCCCTCCACCACCACCACCTCCTCCTCCTCCTCCTCCTCCCCCCCCACCACCCCCACCTGCTATGCCACACCTCATGTCATCTACTTCTGATCCATATCGCACTGTAGTTAATTCAAAAAGTTTTACAGATTCACAGTCTGTGAAAGACAACCCACTTCACTCTATGGCTCAGCCCTTGGCTGCACCAAGGAGTAGCCAACCCATCAGTGATGCAGTGCACTATAAAGTCCCAGAATATAGAGAAATGCAGATGCACATGCCAGAATCTACCAGCTCTTTCAACAGTTTCCCTGTACCACCTCCAGACAATTTTCGACATTCTGATGGTGTAATTATGCATAATAAAGGATATTCCATAAGGCCACCTCACCATGTGCCATCCAATCAGTTTTCTTTTGTTCATGAGGAGCAACATATGAAGCATCGAAGGGAGGTTCCACCACCCCCTTCTTACTCCAATAGACAACAGTTTGTGCAGAACATGGAGAGAGAGAACTTCTACAATAATCATGAGAGATTAAAACCACCTCCATATGATTGCCGGGAGAGATGGAATGTTCCTGCACCTTATTCTGGTCCTCGGTATCAGGACAAAGCTGTGCCTGCCCCATATGGTTGTCATCCATGTGAATCAACTAGAATACCGGGTCATGGGTGGAGATTTCCTCCCCGGTCAATGAATCACAGGAACTCCATGCCATTTAGACCACCCTTTGAAGATGCAATTCCAGTTGCAAACAGAGGTGCACAAATGGGTGCTTCACAATCAGTCTCAGAAAACTCCATTCATGAATTCACAGTCAAGGATGCCAGGGGCAAAGAAGTGAACCTCAGCACCTACAGGGGAAAAGTTCTTCTTGTAATTAATGTCGCTTCAAAATGTGGGTTTGCTGATACCAATTACACCCAGTTAACTCAGCTTTACACCAGATACAAAAGCAGTGGTCTTGAGATATTGGCATTCCCATGCAACCAATTTTTGAAGAAAGAGCCAGGGACTAGCCAAGAGGCCCAAGAGTTTGCCTGTACAAGATACAAGGCTGAGTATCCAATTTTTGGGAAGGTTCGTGTGAATGGATCAGAAACAGCACCTGTCTACAAATTCCTCAAAGCACAGAAATCTGGATGTATGGGGTCTAGGATCAAGTGGAATTTTACTAAGTTTTTAGTCGATGAGAAAGGGCATGTCATCCAACGTTATAGCCCAACCACTCCACCGTTGGCCATTGAAAATGACATCAAGAAGGCATTGGGTGTGGCTTGA 4713 0.4331 MAPSRRKGARKAAAAAAARRQWKVGDLVLAKVKGFPAWPATVSEPEKWGYSNDWKKVLVYFFGTQQIAFCNPADVEAFTEEKKQSLLVKRQGKGADFVRAVQEIVDSYEKLKKETQLDEASCGGNVADANVSSPVNSTAKDQTDAPELTQTLPMKSSNSVIDRHELVCAAEDDSAAVLRDESYNKEASLEEPADNVAAVQSPKPVTYSSRKRSAGDLCPQGGLTQRHTPVRRSRSSSRVQNFVLPCSDGGKSTGNLSTNATQSAPVRKNKRGRKSPDLSGCNDFDSSAFVSNGSMEDNSSEILTIDSDAFSLNDGSAIDSNFKLEHTENIECPEEVELNKGFDLEMKAVVNKKKRKPNRKRATNGASKPTSRLEKETCVQNASQSSQDVCGNSKERCFEQDGDEHLPLVKRLRVRMGKSSSTEAELYSNPQAQVKSCKEDINSPQQMITSSNCENGSSADGDSSVLNGTLDNVSPSKLLAPCSNTQVCTAKKDQTFCFVDGEAALPPSKRLHRALEAMSANAAEEGQAHVEGSSSIMTSSGMCCISAVKRCPCMANNNQEDDGLCSQKSDACGIDSSHINLYNLSTNSNPMISTVNTSSELMDEQLVNFQQHETGKDILPGAADQVVEELSDHVVCQTANADLKIQLHGHISPNLDSKCCVVGSNQDSPDPSLPPNDEDNITTVNNSNTASDASEHNGISLQPAVDVNKNDIILPQNNIDMPHNEVAFCEDTNCLKPAVGDVNKANDLSVVVREIKCKGPEEDMNSVSTSDNCLGEKGNLAIRSSPSLTDGGDCVPQGSPPNTSVCNVSTSDSSNILQNGSCSPDVHLHQKQTSSGPVDGSKNGYVATQQSRSMGKSTEAGRAALLYFEAMLGTLTRTKESIGRATRIAIDCAKFGIAAKVMEILAHNLETESSMHRRVDLFFLVDSIAQSSRGLKGDVCGVYPSSIQAVLPRLLSAAAPPGNSSQENRRQCLKVLRLWLERKILPESIIRHHIRELDVYVSSASAGVFSRRTLRTERALDDPVREMEGMLVDEYGSNSSFQLPGFCMPRMLKDDDEGSDSDEGNFEAVTPEHNSEIHEMTSTIEKHRHILEDVDGELEMEDVAPSCDVEMNSFCNVDRGNATQLEKNLPLAFAPLPQDMAPSSPPPPPSPPPPPPPPPPPPPPPPPPPAMPHLMSSTSDPYRTVVNSKSFTDSQSVKDNPLHSMAQPLAAPRSSQPISDAVHYKVPEYREMQMHMPESTSSFNSFPVPPPDNFRHSDGVIMHNKGYSIRPPHHVPSNQFSFVHEEQHMKHRREVPPPPSYSNRQQFVQNMERENFYNNHERLKPPPYDCRERWNVPAPYSGPRYQDKAVPAPYGCHPCESTRIPGHGWRFPPRSMNHRNSMPFRPPFEDAIPVANRGAQMGASQSVSENSIHEFTVKDARGKEVNLSTYRGKVLLVINVASKCGFADTNYTQLTQLYTRYKSSGLEILAFPCNQFLKKEPGTSQEAQEFACTRYKAEYPIFGKVRVNGSETAPVYKFLKAQKSGCMGSRIKWNFTKFLVDEKGHVIQRYSPTTPPLAIENDIKKALGVA. 1571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05835 1570 MobiDBLite consensus disorder prediction 126 145 - -
Seca8g05835 1570 Pfam PWWP domain 25 108 IPR000313 -
Seca8g05835 1570 CDD PWWP_HULK 25 113 - -
Seca8g05835 1570 Gene3D - 3 108 - -
Seca8g05835 1570 Gene3D - 866 1003 IPR008942 -
Seca8g05835 1570 ProSitePatterns Glutathione peroxidases active site. 1432 1447 IPR029759 -
Seca8g05835 1570 ProSiteProfiles Glutathione peroxidase profile. 1402 1570 IPR000889 GO:0004602|GO:0006979
Seca8g05835 1570 SUPERFAMILY Tudor/PWWP/MBT 19 116 - -
Seca8g05835 1570 ProSiteProfiles CID domain profile. 860 1001 IPR006569 -
Seca8g05835 1570 FunFam Glutathione peroxidase 1403 1569 - -
Seca8g05835 1570 MobiDBLite consensus disorder prediction 124 145 - -
Seca8g05835 1570 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1101 - -
Seca8g05835 1570 MobiDBLite consensus disorder prediction 663 695 - -
Seca8g05835 1570 Gene3D Glutaredoxin 1403 1568 - -
Seca8g05835 1570 SMART 558neu5 867 998 IPR006569 -
Seca8g05835 1570 MobiDBLite consensus disorder prediction 226 266 - -
Seca8g05835 1570 MobiDBLite consensus disorder prediction 821 842 - -
Seca8g05835 1570 ProSitePatterns Glutathione peroxidases signature 2. 1469 1476 IPR029760 -
Seca8g05835 1570 SMART PWWP_4 22 79 IPR000313 -
Seca8g05835 1570 SUPERFAMILY Thioredoxin-like 1411 1567 IPR036249 -
Seca8g05835 1570 MobiDBLite consensus disorder prediction 1135 1185 - -
Seca8g05835 1570 PRINTS Glutathione peroxidase family signature 1531 1540 IPR000889 GO:0004602|GO:0006979
Seca8g05835 1570 PRINTS Glutathione peroxidase family signature 1466 1482 IPR000889 GO:0004602|GO:0006979
Seca8g05835 1570 PRINTS Glutathione peroxidase family signature 1430 1447 IPR000889 GO:0004602|GO:0006979
Seca8g05835 1570 CDD GSH_Peroxidase 1411 1563 IPR000889 GO:0004602|GO:0006979
Seca8g05835 1570 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Seca8g05835 1570 MobiDBLite consensus disorder prediction 1139 1174 - -
Seca8g05835 1570 Pfam Glutathione peroxidase 1412 1520 IPR000889 GO:0004602|GO:0006979
Seca8g05835 1570 MobiDBLite consensus disorder prediction 363 380 - -
Seca8g05835 1570 MobiDBLite consensus disorder prediction 186 283 - -
Seca8g05835 1570 FunFam Enhancer of ag-4 2 861 1003 - -
Seca8g05835 1570 MobiDBLite consensus disorder prediction 351 380 - -
Seca8g05835 1570 Pfam CID domain 868 991 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05835 Seca-Chr8 150977698 150996875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05835 - - gmx:102664053 2076.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05835 8 150977698 150996875 Seca8g05835 8 150977698 150996875 ECH
Seca8g05835 8 150977698 150996875 Seca2g04202 2 126295315 126307773 PCT