Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04202 ATGGCGCCTAGTCGAAGAAAGGGCGCAAAGAAAGCAGCGGCCGCCGCCGCCGTCGAAGCTTGCCGGCAATGGAAGGTCGGTGATCACGTGCTCGCCAAAGTAAAGGGTTTCCCTGCTTGGCCTGCCATGGTAAGTGAGCCAGAGAAGTGGGGTTACTCTACTGATAGGAAGAAAGTATTTGTTTACTTCTTTGGAACCCAACAAATAGCTTTCTGCAATCCTGCCGATGTTGAAGCATTTACTGAAGAGAAAAAACACTCTCTTGTCAAACGTCAAGGAAAGGGTGCTGATTTTGTTCGTGCAGTAAAGGAGATTATTGAAAGTTATGAAAAATTCAAAAGAGAGATTCAACTTGATGAAACTAGCTCTGGTGATGAAGTTGCTAATGCAAATGTGTCAAATCCACTTGACCAATCTGTCAACATAGGGTTAAAGGATCAGATGGATGCTCCTTTGACAATTAATTCACAAATGAAATCTTCAAATTCTGTAATTGACAGACCTGAGCTAGTTTGTGCAGCTGAGGATGACTCAGCTGTTGCATTGATGGACGAATCTTATGATAGAGAGGCATCATTGGATTTGGAGGAACCTACTGTTGTAAAATCACCTTTGCCAGTAAAACAGAGAAATGCACCAGTTCAAAGGTCTAGAAGCTTATCACAGGTCCAAAACATTGTTGTACCTTGTAGTAATGGTGGAAATAATGAGAGCAACATATCAGCTGATGCAATTCAGAATTTGTCTATAAGAAGGAATAAACATATCAGGAAATCACCAACCCTTTTTGGCTGTGATGATACTGATTCATCAGCATTTGTCTCAAATGTTAGCAGGGAGGAAAATGATTCTGAAATTATCACAACCAATTCTGATGCTGGAAGCTTAAATGTGGGAATTGCAATAGATTCTAATTTAAAACTTGAACAGTTGGACACTATTGAGTGCTGTGAATGTGAAGTTGAATTACACAAAGGCCTTGATCTTGAAATACAGGCTGTAATCAATAAGAAAAGAAAACCAAACAGGAAGAGGGAAATTAATGATGCTGGTGCTCACAATGCCAGTCAAATTTTGCAGAAAATGTGTGAAAATTCAAAAGAGAGATGCTCTGACCAAAATGGAGATGAACACTTACCCCTGTTGAAGCGAGCAAGAGTTAGAATGGGTATATCATCATCCACAGAAGCAGAACATAATAGCATTGTACAAGTTAAAGAGAAAAGCTGTAAGGAAGATATTCTTGACCCACTACAGCCCACATCCTCAAATTGTGAAGATGGTAGCCTTGCTGATGGAGATTCATCAATGTTTAATGGAGCTTTGGTTAACGTTTATCCTTCTAGTTTATTAGATCCATGTTCTGAAAATGGGTCTCAGATTTGTAAAATTCAGAAAGACGAAATGTTAGGCTGCTCTATGGATGATGAAGCTGCTTTACCTCCATCTAAACGCCTCCATCGTGCTTTTGAAGCTATGTCTGCCAATGCTGCTGAAGAAGATCAAGTTTGCATGGAATCATCATCATCTGTAATGACATCAAGTGGTAGATGCTGTATATCTACCATCAAGACATGTCCTTGTATGACCACTTGTTCTAATATCAGTTTGTGTAGTTTCTCAACCTGTTCAAATCCAATGACTTTAACAGAGAATAAATCATCTACGGAAGTGGATCAGTTGTTGATCAAGTCCCAACAACATGAGACTGGCAAGGTTTGCTACCCAGGTGCTAATCACCAAGTTGGTGAAGATCTTAGTGATTCTGTGGTTTGTCAGCCTGTTAAAACAGTTTCACAAGTTCAGATAAACAGAAAAGTTTCTCCTGATCTTGATGTGAACTTTAGTAAAGTTGAAAGTAATCAAGAATCACGTGGTCCATCATCACCAGCAAATAATAATGACAATATCAGACCTGTGATTGCGAACCATTCAAATGCATCTGATACATTAGACCATGCTGGAATAAGTCTTGATCCTGCTGCAGGTGCTAATCAAAGTGGTAAATTGTTGCCTCAAAATAGTATTTATGTGCCCCAGAATGTGGTGGTTGCTTGTGAGGATATGAAGCGAGCAGCTGGTGACAGCAGCAAAATCAATGACATGCATGAGGTTGTGAAAGAGGTAAAATTTAAAAGACAGGAGGAGGATATGAATTCGTTTTCAGTATCCAATGATTGTTCAGGTGAAAAGGGTACTTTGGGAATTTTGTCAAGCCCATCCTTTACTGATGGGGGAGTTTGCCTTCCACAAGGTTCACCTCCAAATACATCAGTTTGCAATGTTTCTACATCAGACAGTAGTAATATTCTGCAAAATGGAAGTTGTAGCCCTGATGTACACCACAAGAACACTTCATCTGGTCTTACTGATGGATGGAAAGATGGGACTGTGGCAAATCAACAATCAAGATCTATGGCCAAGTCAACAGAAGCAGGAAATGCTGCTTTGATGTACTTCGAAGCAATGCTTGGGACATTGACAAGGACAAAGGAAAGTATTGGTCGAGCAACACGCATAGCTATTGACTGTGCGAAGTTTGGCATTGCAACTAAGGTGATGGAAATTCTTGTCCAGAATCTGAAAAGTGAGCCAAGCATGCATCGGAAGGTGGATCTGTTTTTCCTTGTTGACTCTATTGCTCAATGTTCTCGAGGCTTGAAAGGAGATGTTGGTGCAGCATATCCATCTGCTATTCAAGCAGTCCTGCCACGCCTCTTGTCTGCTGCTGCTCCTTCTGGAAATACTGCACAAGAAAATCGCAAGCAGTGTCTTAAGGTTTTAAGGCTGTGGTTGGAGAGAAGAATCCTACCAGAACCCGTTATTCGCCATCATATCTGGGAACTGGACTCATATAGCAGTTCAGCTTCTGCAGGTGTCTTCTCACGACGTACATTAAGAAAAGAGAGGCCTATACATGACCCTGTTAGAGAAATGGAGGGCATGCTTGTTGACGAATATGGAAGCAACTCAAGTTTTCAGCTACCTGGATTGTGCATGCCCCGAATGCTTGAAGATGAAGGGAGTGATTCTGACGGAGAGAACTTTGAGGCTGTCACACCTGAGCATGATTCTGGAGCACATGAAGTGCAAGAAACAGCTCATGCAATTGAAAAACACAGGCATGTGTTGGAAGACGTTGATGGCGAGCTTGAAATGGAAGATGTGGCTCCCTCTTTTGATGTTGAATTGAATTTGATTTGTAATGTTGATGGAGGAAATGCCACACAGTTTGAGAAGAATCTTCATCTGTCCTTTGTTCCTCCTTTACCACAGGATGTGCCACCATCTTCCCCACCTCCTCCATCATCCCCTCCATCACCACCACCACCACCTCCTCCACCTCCACCACCTGCACCCACATCGCACCTCATGTTTGCTCCCTCTGATCACTGTCATGCTGTAGTTTATTCAAAAGTTTTTACAGATTCACAGACCATGAAAGACAACACCCTCCATTCTATGGTTCAGCCCTTGGCTACACCAAGAAATAGCCAACCTATTAGTGGTGCAGTGAAGTTTCAAGTCCCAGAATGCAGAGACATGCAGATGCAGATACCAGAGCCTACTTGCTCTTTCAGCACTTTCCCTGTACAACCACCGGCCAATTCCAGGAATTCTGATGGAGTTCCTCTGCATAATAAAGGTTATGTGCTACGGCCACCTCATCCCGTGCCATCCAATCAGTTTTCTTTTGTTAATGGGGAACATCGTGTGAAGTCTCAGAGGGATGTTCCACCACCACCTTCATACTCCAACAGACACCACTTTGAGCAGAACATGAAGAGAGGAAACTTCTATAACCATCACGAGAGATTAAAACCACCTCCATTTGATTACCAAGAGAGATGGAATATTCCTGCACCTTATTCTGGTGTGCCGGCCCCTTATGGTTGTCATCCAAGTGAACCAACTAGATTATCTGGTCATGGGTGGAGATTTCCTCCTCCGTCAATGACTTACAGGGACCCCGTGCCCATTAGACCACCCTTTGAAGATGCAATTCCAGTTGCAAACCGAGGCCCAAGCTTTTGGCGGCCAAGGTGA 4047 0.4255 MAPSRRKGAKKAAAAAAVEACRQWKVGDHVLAKVKGFPAWPAMVSEPEKWGYSTDRKKVFVYFFGTQQIAFCNPADVEAFTEEKKHSLVKRQGKGADFVRAVKEIIESYEKFKREIQLDETSSGDEVANANVSNPLDQSVNIGLKDQMDAPLTINSQMKSSNSVIDRPELVCAAEDDSAVALMDESYDREASLDLEEPTVVKSPLPVKQRNAPVQRSRSLSQVQNIVVPCSNGGNNESNISADAIQNLSIRRNKHIRKSPTLFGCDDTDSSAFVSNVSREENDSEIITTNSDAGSLNVGIAIDSNLKLEQLDTIECCECEVELHKGLDLEIQAVINKKRKPNRKREINDAGAHNASQILQKMCENSKERCSDQNGDEHLPLLKRARVRMGISSSTEAEHNSIVQVKEKSCKEDILDPLQPTSSNCEDGSLADGDSSMFNGALVNVYPSSLLDPCSENGSQICKIQKDEMLGCSMDDEAALPPSKRLHRAFEAMSANAAEEDQVCMESSSSVMTSSGRCCISTIKTCPCMTTCSNISLCSFSTCSNPMTLTENKSSTEVDQLLIKSQQHETGKVCYPGANHQVGEDLSDSVVCQPVKTVSQVQINRKVSPDLDVNFSKVESNQESRGPSSPANNNDNIRPVIANHSNASDTLDHAGISLDPAAGANQSGKLLPQNSIYVPQNVVVACEDMKRAAGDSSKINDMHEVVKEVKFKRQEEDMNSFSVSNDCSGEKGTLGILSSPSFTDGGVCLPQGSPPNTSVCNVSTSDSSNILQNGSCSPDVHHKNTSSGLTDGWKDGTVANQQSRSMAKSTEAGNAALMYFEAMLGTLTRTKESIGRATRIAIDCAKFGIATKVMEILVQNLKSEPSMHRKVDLFFLVDSIAQCSRGLKGDVGAAYPSAIQAVLPRLLSAAAPSGNTAQENRKQCLKVLRLWLERRILPEPVIRHHIWELDSYSSSASAGVFSRRTLRKERPIHDPVREMEGMLVDEYGSNSSFQLPGLCMPRMLEDEGSDSDGENFEAVTPEHDSGAHEVQETAHAIEKHRHVLEDVDGELEMEDVAPSFDVELNLICNVDGGNATQFEKNLHLSFVPPLPQDVPPSSPPPPSSPPSPPPPPPPPPPPAPTSHLMFAPSDHCHAVVYSKVFTDSQTMKDNTLHSMVQPLATPRNSQPISGAVKFQVPECRDMQMQIPEPTCSFSTFPVQPPANSRNSDGVPLHNKGYVLRPPHPVPSNQFSFVNGEHRVKSQRDVPPPPSYSNRHHFEQNMKRGNFYNHHERLKPPPFDYQERWNIPAPYSGVPAPYGCHPSEPTRLSGHGWRFPPPSMTYRDPVPIRPPFEDAIPVANRGPSFWRPR. 1349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04202 1348 SMART 558neu5 819 950 IPR006569 -
Seca2g04202 1348 SMART PWWP_4 24 81 IPR000313 -
Seca2g04202 1348 MobiDBLite consensus disorder prediction 613 640 - -
Seca2g04202 1348 MobiDBLite consensus disorder prediction 1086 1126 - -
Seca2g04202 1348 ProSiteProfiles PWWP domain profile. 26 83 IPR000313 -
Seca2g04202 1348 MobiDBLite consensus disorder prediction 1089 1123 - -
Seca2g04202 1348 ProSiteProfiles CID domain profile. 812 953 IPR006569 -
Seca2g04202 1348 SUPERFAMILY Tudor/PWWP/MBT 19 118 - -
Seca2g04202 1348 CDD PWWP_HULK 27 113 - -
Seca2g04202 1348 FunFam Enhancer of ag-4 2 814 955 - -
Seca2g04202 1348 Pfam CID domain 819 942 IPR006569 -
Seca2g04202 1348 Gene3D - 816 956 IPR008942 -
Seca2g04202 1348 Pfam PWWP domain 27 109 IPR000313 -
Seca2g04202 1348 Gene3D - 16 119 - -
Seca2g04202 1348 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1054 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04202 Seca-Chr2 126295315 126307773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04202 - - gmx:112997599 1753.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04202 2 126295315 126307773 Seca2g04202 2 126295315 126307773 ECH
Seca8g05835 8 150977698 150996875 Seca2g04202 2 126295315 126307773 PCT